Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01960 ATGACGATGTTGTTGGACGACGTTCTTCGATCCATCGAGCTATGGCTTCGTCTAATAAAGAAACCACAACCCCAAACCTTCGTTAACCCTAATCTTGACCCTGTTTTGTTAGTACCTGGTGTTGGTGGTTCCATTCTTAACGCTGTAAACGAAACTGATGGTAGTCAGGAACGTGTTTGGGTTCGTTTTCTCTCTGCTGAGTACAAGTTGAAAACTAAGCTTTGGTCTCGTTATGATCCTTCTACTGGAAAAACTGTAACAATGGATCCAAAATCAACAATTGTGGTTCCTGAAGATAGGCATGGACTCCATGCAATTGATGTTTTAGATCCTGACTTGGTAATTGGAAGTGAGGGTGTATATTATTTCCATGACATGATAGTTCAAATGCAGAAATGGGGGTATCAAGAGGGAAAGTCACTTTTTGGCTTTGGATATGATTTTCGTCAAAGCAACAGGTTGCAGGAAACAATGGATCGGTTTGCTGAAAAATTGGAATTAATTTATAATGCTGCTGGAGGGAAAAAGATAAACGTCATAAGTCATTCTATGGGTGGTCTTTTGGTGAAGTGTTTCATGTGCCTGCATAGTGATATTTTTGAGAAATATGTTAAGAATTGGATTGCAATTGCCGCACCATTCCAGGGTGCACCTGGATGTACCAATTCTACCTTTTTAAATGGAATGTCATTTGTGGAAGGATGGGAGCAAAACTTTTTTATTTCCAAATGGAGCATGCACCAGCTGCTGATTGAATGTCCATCAATATATGAACTGATGGCTTGTCCTAATTTTGATTGGCAACACGTTCCTCTTCTGGAATTGTGGCGTGAAAGACTTCATTCGGATGGGAAATCTCATGTTATTCTTGAGTCATATCCGCCATGTGATACCGTTGAGATTTTGAAGCAAGCTCTTGTTAAAAACAAAGTTAGTTATGATGGCGAGGAATTGCCTCTGCCCTTCAACACACAGATTTTGGAATGGGCAAACAAAACAAGGGAGATTCTATCTTCTGCCAAACTTCCGCCGGGTGTTAAATTTTACAATGTTTATGGGACCAGTCTTGCGACACCTCATAGCATTTGCTATGGAAATGCGGACAAGCCTATCTCAGATCTGCAAGATTTACGTTATTTGGAGGCCAGATACGTGTGCGTTGATGGTGACGGAACAGTTCCAGTAGAGTCAGCTAAGGCTGATGGGTTCAATGCGGAGGAGAGGGTTGGAATCCCAGGTGAACATCGGGGTATCCTTTGTGAGCCTCATCTATTTAGGATTCTGAAGCACTGGCTGAATGCAGGAGATCCAGATCCCTTTTACAATCCTATCAATGATTATGTGATCCTACCCACTGCTTTTGAAATGGAGAGACACAAAGAGAAGGGTGTAGAAGTAACATCCCTTAAAGAGGAATGGGAAATTATTTCCAACGACCAAAATGGCCAAAGCAATACTGATAATAAAATGTCTTTGAGCTCAATATCAGTTTCGCAAGAAGGAGCTGATAAATCCCATTCCGAGGCTCATGCTACTGTCTTTGTTCACCCTGGCAATGACGGTAAACAGCACATTGAACTGAATGCCTTGGCTGTTTCAATTGATGCCTCATGA 1614 0.4157 MTMLLDDVLRSIELWLRLIKKPQPQTFVNPNLDPVLLVPGVGGSILNAVNETDGSQERVWVRFLSAEYKLKTKLWSRYDPSTGKTVTMDPKSTIVVPEDRHGLHAIDVLDPDLVIGSEGVYYFHDMIVQMQKWGYQEGKSLFGFGYDFRQSNRLQETMDRFAEKLELIYNAAGGKKINVISHSMGGLLVKCFMCLHSDIFEKYVKNWIAIAAPFQGAPGCTNSTFLNGMSFVEGWEQNFFISKWSMHQLLIECPSIYELMACPNFDWQHVPLLELWRERLHSDGKSHVILESYPPCDTVEILKQALVKNKVSYDGEELPLPFNTQILEWANKTREILSSAKLPPGVKFYNVYGTSLATPHSICYGNADKPISDLQDLRYLEARYVCVDGDGTVPVESAKADGFNAEERVGIPGEHRGILCEPHLFRILKHWLNAGDPDPFYNPINDYVILPTAFEMERHKEKGVEVTSLKEEWEIISNDQNGQSNTDNKMSLSSISVSQEGADKSHSEAHATVFVHPGNDGKQHIELNALAVSIDAS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01960 537 Gene3D alpha/beta hydrolase 68 329 IPR029058 -
Trre7g01960 537 Pfam Lecithin:cholesterol acyltransferase 90 398 IPR003386 GO:0006629|GO:0008374
Trre7g01960 537 SUPERFAMILY alpha/beta-Hydrolases 29 450 IPR029058 -
Trre7g01960 537 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 22 460 - -
Trre7g01960 537 MobiDBLite consensus disorder prediction 477 502 - -
Trre7g01960 537 MobiDBLite consensus disorder prediction 477 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01960 Trre-Chr7 15480545 15487413 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01960 7 15480545 15487413 Trre7g01960 7 15480545 15487413 ECH