Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01952 ATGGGGTTCAATGATAAGTACAACAATGCTGGTGGAAGAGACCCGGATTTTGGTGCAATCTTTATTTCAAACAGTGGATCGAAAAGAGAATGTTTCCATAGGGGATTATTCGGGCTCCCGTCTTCTTATATCCCTTTTGTCGAGAAGATTAAAGCTGGGTCGGCTTTGTTTTTATTTGAATATGAGAAAAGATTACTTCATGGTGTTTTCAAGGCTACTTGTGATGGAGGTATTAATATCATTCCTAAGGCATTCACTTCGTTAGGGATTCCATATCCTGCTCAGGTTAAGTTCATTACAATTTGGGATTGTAAGCCACTCCCTGAAAGGATATTCCGTGATGCAATCAGAGAGAATTACTTTTCAGCTAACAAGTTTCACTTTGGGCTATCTGAAGATCAGGTCTATAAACTTCTACATTTGTTCAGCATGAACAAGCTAGAACCGGAGGTTCCTAGGAGGCATATATCTAGAACAGATGATATGAAATCAGAACGGTATCCGGTACGTAAAGTTGGAAGATCTGTTGGTCATGGAATGCTTGATGAAAGTGTTCAAAATGACCAAGTTTTGGGTGACAATAACTCATCCATCTTGATGCGTAATTACCAAGGAGGTTCTACACTGTACAACGGATTCAATGCGGATGATATTTTAGTAAACCAACAAAGAAGGTCTTCTGAGCTTGGAATGGACTATACAAGTGGATATGTTAGTGATTATGTGCATTCAAATGATGAAAACAGATTTGCTGTGCGCAACAATGAAGATTATATGGATAACTATGTTGCCAATCCCACTCTCGATACTGCAAATGGATATGTTGGCGATTATTTGGCAACAAAAGATGACAGCAGGTTTACGACCCATGAAAACGAAGATTATATGGGTACACATCGCAGGCCATACACCATAGGTGGATACTCCAAAATGCCATCTGATAAGTTTAGAGTTCACGGCGATGGCAGGTCACCAATTAGTGATAGGTTAATGGGTGAAGATATAAGAAAGACGGATAAGAGGATGATTTTTTCAGATAATATTCCTGGTTTACATGATTCCAATGTTGATCTGCCTGCCTTCTACAGCAAGTCCTATTTAGAGCAAAATTCTTTGGTTGAAAATCATCTCAGGTCAACTTCTGATATGATTCACCCATTCCATTTAAACGCACGTGCAACACAAGGAGACGAGAGTTCTATTCTGTATAATTCAGATGCTCCTGGCTTAAACCCCAGACAGTTATCCTCTTTTGGAAATAATGGTTCTGAGTCAATGACAGATAGAGTTTCTCCTTCAACCAACCGCCGAAGGAATTCAGTGATGCATACGGAACTGAAAGACAGATACAAATGGCAGAATATTGGTGATTGTTTTTCAAATTCTGTATTGTATGGCAGTAACAGGGATTGCATGCCTTTCAATGAGACTCATAATTCTGACCAGTTGGCATCAGAATCTGCTTTATATGAGGCTTGCAATTACATTCCTTCCTTAAAGTCTTCACCAGTTCCTATTCCGTCTTCAGATATTGGAAATAGTGGCAGGACACATGAACCATTTTCTTCGTTGTTCCATAACCACAAATCATATTTAGACAATGATGTTCATCCCATGGCATTGCAAAACTATCCGAGTCATGAGATAACACCACCAATGAAAAATGAAACACTAAGTCCTGATGTTCCTTTTGCAAATGAGGGTCATTTTCAAGTCCAATATGATGATCTATTGGATCATGGATATGATATTGGATATTATGATGATTCTCAAAATAGCAATCATGGTCATCCAAAGAGAAAAAGTACTGTGTTTGATCGTTTATCTCTTGCGCAGAATGTTAACAAACGAAAAAGTGGAGACAATGCACAAAATGATGAGTATGATTTCGTTACTTCAGTAGATGAAGTGATGGAAATGGTTCGTCAGAATCACAACCATGGGATGACAAAAAGAAAGCCAAAGCCTAGTCAGAGGAAGAGAAATGATTGCTTTGAAAGTGCTTTGGAACACAAAAAGGATGAAAGTTTGAGGAATAAAACTCAAATCAGTAGCAGTAGTCAGAGAAAGAAGGGAGATCGCTTTGAAAATGCCTTGGAACACAACAAGGATGAAAATTTGAGGAATAAAACTCAAATCAGTAGTCCAAGGAAGAAGAGAGACTGCTTCGAAACTGCCTTACAACTCAGCGAGGATGAAAGTTTGAGGAATAAAACTCAAATCAGTAGTCCGAAGAAAAAGAAGAAGGGAGGTCCCTCTGAAAATGCTTTGGAAGATCGAAATACGGATTCCACAACTGTGACTGGAAGCAGTCCTAAAACAAAAGCCAAAAAGGTAGATTTTGTTGATTTCAAGCGTCGAAGCAAGGTGAGGAAACATACTGATGAGATTGAGAGAAGCTCCAATGAGAGTAAAAAGAGTGAGAACTTGGTGATTGTGCAACAAAAGAGAAGAAAGTTGATCAGGCCTAATTTCAACAAGAGTGCATCTTTTGAAGACAAAGATTATGATCATGGCGCTTCTCAAAATTTACAACTACCATTGCCAAATGGAAGTTGTAATAAAGATGTCATTGAAATCTGCTGTACGTTGGTGAAACAATGTGGTAATGATGATGTTAAAATAGAGGCTGAAGTGCAAAATATCATTGGTCCAACATATTCTGAAGGTAATAATAGTAGTCATGCTATAAAATTTATCTGCAGTGAAGGAGGAGAAAACGAGAATGTTAGCACCCTTGCTGCATTAACTGATGGATCAGAATGTGTGGATAACAAAAATCACCAAGATGTTTTGTTCTCAGCTTCTTGCAATGAAGAGAGTTCTCATTCCAAGGAAGGTTCATGTATGATGGATAATGTCAAAGCAGCATCTCTGGTAACTGAATCGTTGGATGCAATTTGTCAAGAAAAGGCAAATGTTGGCGCCCTTCCTGCATTAAACGATGGATCAGAATGTGCAGATAAGAAAAATTGTCAAAAGATTTTGTCCTCAGCTTCTTGCAATGAAGAGAGTTCTCATGCCAAGGAAGGTTTATGTATGATGCATAATGTAAAATCAGCATCTCTGGAGATGGAATCATTGCATGCAATTTATCAAGAAAAAGCAAATGCTGGCACCCCTCCTCCATTAAATGATGGATTGGAATGTGTGGATAACAAGAATCACCAAAGGGTTTTGTCGAGTTCTCATACCAAGGAAGGTTCATGTGTGATGGATAATGTAAAATCAGCATCTTTGGAGATAGTGTCATTGCATGCAATTTGTGAAGAAAAAGCAAACAATGGCACCCTTCTTCGTCCATTAAATGATGGATCAGAATGTGTCGACAACAAAAATCACCAAAAGGTTTTGTCCTCAACTTCTTGCAAAGATTGGAGTTCTCATACCAAGAAAGGTTCATGTGTGACGGATAATATAAAATCAACAACACTGGAGAATGAATCATTGAAAGCAATTTGTCAAGAAAATTATGAAAATAAGATCATATGTGCTGACCGTGGTATCAATGCCGATGATGAAATGCCAAAAGATTCTGGCTCCTTCTCCATTGAAGCTAAAGATGGATCTGAATATTTAGGTAACTCTGGTAATGAAAAAGCTCCAATTGAAACTTCTTGTCACATTGAGGCTTGCATGTAG 3642 0.383 MGFNDKYNNAGGRDPDFGAIFISNSGSKRECFHRGLFGLPSSYIPFVEKIKAGSALFLFEYEKRLLHGVFKATCDGGINIIPKAFTSLGIPYPAQVKFITIWDCKPLPERIFRDAIRENYFSANKFHFGLSEDQVYKLLHLFSMNKLEPEVPRRHISRTDDMKSERYPVRKVGRSVGHGMLDESVQNDQVLGDNNSSILMRNYQGGSTLYNGFNADDILVNQQRRSSELGMDYTSGYVSDYVHSNDENRFAVRNNEDYMDNYVANPTLDTANGYVGDYLATKDDSRFTTHENEDYMGTHRRPYTIGGYSKMPSDKFRVHGDGRSPISDRLMGEDIRKTDKRMIFSDNIPGLHDSNVDLPAFYSKSYLEQNSLVENHLRSTSDMIHPFHLNARATQGDESSILYNSDAPGLNPRQLSSFGNNGSESMTDRVSPSTNRRRNSVMHTELKDRYKWQNIGDCFSNSVLYGSNRDCMPFNETHNSDQLASESALYEACNYIPSLKSSPVPIPSSDIGNSGRTHEPFSSLFHNHKSYLDNDVHPMALQNYPSHEITPPMKNETLSPDVPFANEGHFQVQYDDLLDHGYDIGYYDDSQNSNHGHPKRKSTVFDRLSLAQNVNKRKSGDNAQNDEYDFVTSVDEVMEMVRQNHNHGMTKRKPKPSQRKRNDCFESALEHKKDESLRNKTQISSSSQRKKGDRFENALEHNKDENLRNKTQISSPRKKRDCFETALQLSEDESLRNKTQISSPKKKKKGGPSENALEDRNTDSTTVTGSSPKTKAKKVDFVDFKRRSKVRKHTDEIERSSNESKKSENLVIVQQKRRKLIRPNFNKSASFEDKDYDHGASQNLQLPLPNGSCNKDVIEICCTLVKQCGNDDVKIEAEVQNIIGPTYSEGNNSSHAIKFICSEGGENENVSTLAALTDGSECVDNKNHQDVLFSASCNEESSHSKEGSCMMDNVKAASLVTESLDAICQEKANVGALPALNDGSECADKKNCQKILSSASCNEESSHAKEGLCMMHNVKSASLEMESLHAIYQEKANAGTPPPLNDGLECVDNKNHQRVLSSSHTKEGSCVMDNVKSASLEIVSLHAICEEKANNGTLLRPLNDGSECVDNKNHQKVLSSTSCKDWSSHTKKGSCVTDNIKSTTLENESLKAICQENYENKIICADRGINADDEMPKDSGSFSIEAKDGSEYLGNSGNEKAPIETSCHIEACM 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01952 1213 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED 13 787 - -
Trre7g01952 1213 MobiDBLite consensus disorder prediction 757 773 - -
Trre7g01952 1213 MobiDBLite consensus disorder prediction 670 811 - -
Trre7g01952 1213 MobiDBLite consensus disorder prediction 644 663 - -
Trre7g01952 1213 MobiDBLite consensus disorder prediction 412 438 - -
Trre7g01952 1213 MobiDBLite consensus disorder prediction 776 811 - -
Trre7g01952 1213 ProSiteProfiles DCD domain profile. 14 144 IPR013989 -
Trre7g01952 1213 SMART dcd 14 144 IPR013989 -
Trre7g01952 1213 MobiDBLite consensus disorder prediction 687 727 - -
Trre7g01952 1213 Pfam Development and cell death domain 18 142 IPR013989 -
Trre7g01952 1213 Coils Coil 790 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01952 Trre-Chr7 15411164 15415040 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01952 7 15411164 15415040 Trre7g01952 7 15411164 15415040 ECH