Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g01924 ATGGATCCTAATTCTTGCAACATGCATTCACATTGTATACACATGGAAATTCATCAAGTTGTTCCACCACCCCACAAAAGCACTTTACACAAACTCAAAATTAGGCTCAAGGAAACTTTTTTCCCTGATGATCCTCTACGCCAATTCAAAGGAAAATCACTTAAAACAAAAATGATTTTAGGAGCTAAATATTTTTTCCCTATTCTTCAATGGGGTTCTAATTATAGCTTCAAACTCTTTAAATCTGACTTTATTTCTGGTCTCACTATTGCTAGCTTAGCAATCCCACAGGGAATTAGTTATGCCAAGCTTGCAAATCTTCCTCCAATTGTAGGATTATACTCTAGTTTTGTTCCTCCACTTATTTATGCTGTTCTTGGAAGTTCAAGGGATCTAGCAGTAGGACCTGTTTCAATTGCATCTCTTGTTTTAGGATCCATGCTTAGACAAGAAGTATCTCCTTCAGCAGAACCTGTTCTGTTTCTACAACTTGCTCTTACTTCAACTTTCTTTGCTGGTCTATTTCAAGCTTCACTAGGAATTCTAAGATTAGGATTTATCATTGATTTTTTATCAAAGGCAATCTTAATTGGATTCATGGCTGGTGCTGCTATAATTGTGTCTTTGCAACAACTTAAGAGCTTACTTGGAATTACACATTTTACTAAAGAAATGGGTCTTGTTCCTGTTATGAGTTCTGTTTTTCACAATATACATGAGTGGTCATGGCAAACAATAGTTATGGGAATTTGCTTCTTGGTGCTACTACTAATAGCAAGACACGTTAGTATAAGGAAACCAAAGCTATTTTGGGTCTCTGCTGGAGCACCTCTTATGTGTGTCATCATCTCTACTCTTTTTTGCTTTGCAATCAAGGCTCAAAATCATGGCATCAGTTTAATTGGAAAATTACATGAAGGAATAAATCCTGCTTCATGGAATATGTTGAAATTTCATGGAAGTCACCTTGGTCTAGTCATGAAAACTGGCCTTATCACTGGCATTTTGTCCCTCACTGAAGGTATTGCTGTAGGAAGGACATTTGCAGCTCTGGGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATTGGATTTATGAATGTGGTTGGCTCCTCCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTCGTTCAGCTGTTAATAATAACGCAGGAGCGAAAACAGCAGCTTCAAATATAGTAATGTCTGTGACGGTGATGGTGACACTTCTTTTTCTTATGCCATTGTTCCAATACACACCTAATGTTGTATTGGGTGCAATCATAGTCACAGCAGTGATTGGCCTCATCGATATCCCTGCTGCTTGCCACATTTGGAAGATAGACAAATTCGACTTCCTTGTCATGTTAACTGCTTTCTTGGGTGTTATTTTTATCTCAGTCCAAGAAGGTCTTGCTGTTGCAGTTGGATTATCAACTTTTAGGATACTCCTGCAAATTACAAGGCCTAAAACAGTAATGATGGGGAACATACCAGGTACAGACATATATAGAAATCTTCATCAATACAAGGAAGCTACAAGAATACCAGGATTTCTTATTTTAAGCATTGAAGCTCCAATCAATTTTGCAAACATCACATATCTCAATGACAGGACATTACGATGGATTGAAGAGGAAGAAGAAGATAACATAAAGGAACACTCAAGTCTTCGATTTTTAATCCTGGATATGTCAGCTGTGAGCGCCATTGACACAAGTGGAATCTCACTTTTCAAGGAGTTAAAGGCAACACTGGAAAAGAAGGGTGTTGAACTTGTGTTGGTTAATCCTCTCGCCGAGGTCATTGAAAAGCTGAAAAAAGCAGACGAATCTAATACTTTCATACGAGCAGACAACCTTTTCTTGACAGTTGGAGAGGCTGTAGCGTCACTTTCATCAACAATGAAGAGCCAATCAACCACGACAGAAGAAACACATACAATCGTTCCACATTACTGA 1968 0.3821 MDPNSCNMHSHCIHMEIHQVVPPPHKSTLHKLKIRLKETFFPDDPLRQFKGKSLKTKMILGAKYFFPILQWGSNYSFKLFKSDFISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPSAEPVLFLQLALTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTKEMGLVPVMSSVFHNIHEWSWQTIVMGICFLVLLLIARHVSIRKPKLFWVSAGAPLMCVIISTLFCFAIKAQNHGISLIGKLHEGINPASWNMLKFHGSHLGLVMKTGLITGILSLTEGIAVGRTFAALGNYKVDGNKEMMAIGFMNVVGSSTSCYVTTGAFSRSAVNNNAGAKTAASNIVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAACHIWKIDKFDFLVMLTAFLGVIFISVQEGLAVAVGLSTFRILLQITRPKTVMMGNIPGTDIYRNLHQYKEATRIPGFLILSIEAPINFANITYLNDRTLRWIEEEEEDNIKEHSSLRFLILDMSAVSAIDTSGISLFKELKATLEKKGVELVLVNPLAEVIEKLKKADESNTFIRADNLFLTVGEAVASLSSTMKSQSTTTEETHTIVPHY 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g01924 655 PANTHER SULFATE TRANSPORTER 29 637 IPR001902 GO:0016020|GO:0055085
Trre7g01924 655 NCBIfam sulfate permease 67 630 IPR001902 GO:0016020|GO:0055085
Trre7g01924 655 Gene3D STAS domain 491 637 IPR036513 -
Trre7g01924 655 Pfam Sulfate permease family 80 460 IPR011547 GO:0016020
Trre7g01924 655 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Trre7g01924 655 FunFam Sulfate transporter 31 491 637 - -
Trre7g01924 655 Pfam STAS domain 512 630 IPR002645 -
Trre7g01924 655 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Trre7g01924 655 CDD STAS_SulP_like_sulfate_transporter 512 612 - -
Trre7g01924 655 SUPERFAMILY SpoIIaa-like 516 634 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g01924 Trre-Chr7 15127265 15134624 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g01924 15 641 Inorganic Solute Cotransporters AT3G15990 66.772 0.0 844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g01924 7 15127265 15134624 Trre7g01924 7 15127265 15134624 ECH