Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00088 ATGGAAGCATATTCCATAAGACTCAAAATATCCTTTATTGTGAGTTTGATAGCTTTCCCTATAGTTATCATGGTTACCTTAATGTACCAAAACTCTAGTTTTGGGCTATTTGAAGAGTTTTCAAAAGGCATGCCAATGGGAGGAATGGCTCATAAGAACGTTACAGCTGGAGGACCAAATGTTACAACTAATAATGAGTTTGGATTGAGATCAAATGTAACACTTGACAACTTTGGAGGAAGAGAAAAGGGTGATGTCAAAATCAAAAGCTCCAAAAGTATCCCATTGACAAATTCAACTTCAACTCCATCTAAAGAAATCCCTGATGATGACAATGGCAAATTGCTTGATGGACTATTAGTTTCTGGATTTGATGAAGCATCATGCATAAGCAGGTCACAATCACATTTCTACCACAAACCTTCTCCTCACAAACCTTCTTCATATTTGATATCTAAACTAAGAAAATATGAAGAACTTCATAGAAAATGTGGACCTAACACTAGAGCTTACAATAAAGACATGAAAATTATTGCAAATTCTAAGGAAAATAGTACAAATTCTGCTGCAACAACTTGCAAATACATTATTTGGTTACCTACAAATGGTTTAGGTAACCAAATAATTAGCATGGCTTCATCATTTCTCTATGCACTCCTAACAGATCGAGTTTTGCTCGTACAATTTGGGAATGATAAAGAAGGTTTATTTTGCGAGCCATTTCTAAATTCAACATGGTTACTACCAGAGAATTTCCCCTTTTGGGATGCACAAAATGTTCTAGAATATCAAGGCATAATTGAGATGGAAATGACTAATACATTAAATGAATTTTTGCCATCAGCTATGTATGTGGATCTAAAATACAGTCCTACACACGATGAAAGATTTTTTCACTGCGACCATAGTCAATTTCTTCTCAGTCAAATTCCTCTGTTGTTTTTGGAAGCAGGTCAGTATTTTGTACCTTCATTTTTCATGACGCCAATTTTCAAAGAAGAGTTAAACAAAATATTTCCAGAAATTACCTCTATTTTTCACCATTTGGGACGCTATCTATTTCACCCGGCAAATGAACCATGGGAACAAATTACTAGTTTCTATCAACAACACCTTGCTAAAGCAAATGAGAGAATTGGGCTTCAAATAAGAGTGGTTAACCCTGAAACAACTCCACACAAAATTGTTATGAATCAAATTTTGAATTGCACGTTGAAGAATAAGTTACTTCCAAAAGTACGTGGTACAAAAAATATGTCAGACTCTTCTAGCGACAAAAACAAGACGATTAAAAAGGTTGTTCTTGTGACATCTTTATATCCACAATATGGAAAGAATTTAACGAAGATGTATCGGCATAAATCAACTGTTACAGGGGAAGTAATTGAGGTTTATCAACCAAGTAGTGAAAAGGAACAAAAATTTGGTGATAACAAGCATAATTTGAAGGCTTGGGTTGAAATGTATTTACTAAGTTTATCTGATGTGTTGTTGACTACACATCAATCAACTTTTGGTTATGTTGCTAAGGCTTTGGGAAATTCAATATCATGGATTCTTTATCATCCAATTTATAATGAAAATAAGGAGATTTGTGAACGTGAGTTTACATTAGAGCCTTGTTATCATTATCCTCCTTTACATTATTGTGATGGAAAGATTATTGAAGATGTTGCTTCTTCTTTTCATAATATCAGACATTGTAAGGATTTTTCTTTTGGTTTGAAGCTGGTAAACAATTTTGTTTAG 1749 0.3379 MEAYSIRLKISFIVSLIAFPIVIMVTLMYQNSSFGLFEEFSKGMPMGGMAHKNVTAGGPNVTTNNEFGLRSNVTLDNFGGREKGDVKIKSSKSIPLTNSTSTPSKEIPDDDNGKLLDGLLVSGFDEASCISRSQSHFYHKPSPHKPSSYLISKLRKYEELHRKCGPNTRAYNKDMKIIANSKENSTNSAATTCKYIIWLPTNGLGNQIISMASSFLYALLTDRVLLVQFGNDKEGLFCEPFLNSTWLLPENFPFWDAQNVLEYQGIIEMEMTNTLNEFLPSAMYVDLKYSPTHDERFFHCDHSQFLLSQIPLLFLEAGQYFVPSFFMTPIFKEELNKIFPEITSIFHHLGRYLFHPANEPWEQITSFYQQHLAKANERIGLQIRVVNPETTPHKIVMNQILNCTLKNKLLPKVRGTKNMSDSSSDKNKTIKKVVLVTSLYPQYGKNLTKMYRHKSTVTGEVIEVYQPSSEKEQKFGDNKHNLKAWVEMYLLSLSDVLLTTHQSTFGYVAKALGNSISWILYHPIYNENKEICEREFTLEPCYHYPPLHYCDGKIIEDVASSFHNIRHCKDFSFGLKLVNNFV 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00088 582 Gene3D - 361 531 - -
Trre7g00088 582 FunFam Galactoside 2-alpha-L-fucosyltransferase 191 242 - -
Trre7g00088 582 MobiDBLite consensus disorder prediction 91 106 - -
Trre7g00088 582 Gene3D - 190 245 - -
Trre7g00088 582 MobiDBLite consensus disorder prediction 84 109 - -
Trre7g00088 582 Pfam Xyloglucan fucosyltransferase 100 550 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre7g00088 582 PANTHER FUCOSYLTRANSFERASE 2-RELATED 34 579 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00088 Trre-Chr7 585800 588574 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00088 111 578 Xyloglucan Fucosyltransferase1 AT2G03220 46.444 1.38e-145 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00088 K13681 - gmx:100818288 632.869