Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00087 ATGTCCTTTATTGTGAGTTTGATAGCGTTTCATGCAATTATCATGGTTACTATAATGTACCAAAACTCTAGTTTTGGGCTATTTGAATGGTTTTCAAAAGGCATGTCAATGGGAGGAATGACTCATGCGAACGTTAAAGCTGGAGGACCAAATGTTACAATTATTGGATTGAGACAAAATGTAACACATGACAACTTTGGAAGAAGACACAAGAGTGATGCCAAATTCGAAAGCTCCAAAAATATTCCATTGGCAAATTCAACTTCAACTCCATCTAAAGAGATCAATGATGATGATAAAGATACATTGCTTGATGGATTATTAGTTTCTGGATTTGATGAAGCATCATGCATAAGCAGGTCACAATCACATTTCTACCACAAACCTTCTCCTCACAAACCTTCTCCATATTTGATATCTAAATTGAGAAAATATGAAGAACTTCATAGAAGGTGCGGACCTAACACTAGAGCTTACGATAAAGATATGAAAATTGTTGCAAACTATAAACAAAATGATACTAAATGTGCTTCAACAACATGCAAATATATTATTTGGGTACCTATAAATGGTTTAGGTAACCAAATAATTAGCATTGCTTCAACATTTCTTTACGCGCTCCTAACAGAGCGTGTTATGCTCGTACAATTTGGAAAAGACAAAAAAGGTTTATTTTGCGAACCATTTCTAAATTCTACTTGGTTGTTGTCGAAAGATTCTCCTTTTTGGAATACAAAAAATGTTCAAAGATATCAAAGAACAATTGAAATGGAAATGAATAATACATTGAATGAAGATTTGCCATTAGCTATGTTTGCAGATCTAAGTTATTCCTATACATTTGAAGAAAGATTCTTTCACTGTGATCACAGTCAATTTCTTCTCAATAAAATTCCTTTATTGTTTTTGAAATCAAGTACGTATTTTGCACCTTCGTTTTTCATGACACCTGTTTTTGAAAAAGAGTTAAATAAAATGTTCCCTGAAATAACATCAATTTTTCACCATTTGGGACGTTACCTTTTTCACCCTGCAAATGAAGCATGGGAACAAATCACAAATTTCTATCAACAACATCTTACTAAAGCAAATGAGAGAATAGGAATTCAAATAAGAGTTTATGATCCCAATTCAACTCCACACCAAGTTGTTATGAATCACATTTTGAATTGCACATTAGAGAATAAATTACTTCCAAAAGTACTTGGTACAAAAAATATATCATTGTCTACTTTGAGTGGAAAAAACAAGACAAATACAAAGGTTATTCTTGTGGCATCATTATATCCACAATATGGAAACAATTTAAGGACAATGTATCAGAATAAATCAACGGTTACCGATGAAGTAATTGAGGTTTATCAACCAAGTAGTGAAGAGCAACAAAAATTTGATGATACCAAGCATAATATGAAGGCTTGGGTGGATATGTATTTACTAAGTTTATCTGATGTGTTGGTGACTACATCTCAATCAACTTTTGGCTATGTTGCTAAGGCTTTGGGAAACTCAAGACCATGGATTCTTTACAATCCGGTTAATAATCAAACTAAGGAGATTTGTGAACGTGAGTTTACGGTGGAGCCTTGTCATAAATATCCTCCTTTACATTATTGCAATGGAACATCTATTGAAGATATTTCTTCTTCTTTTCATAATATTAGACATTGTAAAGATTTTCCTTTTGGTGTGAAGCTGGTTAACGGATTTGTTTAG 1716 0.3281 MSFIVSLIAFHAIIMVTIMYQNSSFGLFEWFSKGMSMGGMTHANVKAGGPNVTIIGLRQNVTHDNFGRRHKSDAKFESSKNIPLANSTSTPSKEINDDDKDTLLDGLLVSGFDEASCISRSQSHFYHKPSPHKPSPYLISKLRKYEELHRRCGPNTRAYDKDMKIVANYKQNDTKCASTTCKYIIWVPINGLGNQIISIASTFLYALLTERVMLVQFGKDKKGLFCEPFLNSTWLLSKDSPFWNTKNVQRYQRTIEMEMNNTLNEDLPLAMFADLSYSYTFEERFFHCDHSQFLLNKIPLLFLKSSTYFAPSFFMTPVFEKELNKMFPEITSIFHHLGRYLFHPANEAWEQITNFYQQHLTKANERIGIQIRVYDPNSTPHQVVMNHILNCTLENKLLPKVLGTKNISLSTLSGKNKTNTKVILVASLYPQYGNNLRTMYQNKSTVTDEVIEVYQPSSEEQQKFDDTKHNMKAWVDMYLLSLSDVLVTTSQSTFGYVAKALGNSRPWILYNPVNNQTKEICEREFTVEPCHKYPPLHYCNGTSIEDISSSFHNIRHCKDFPFGVKLVNGFV 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00087 571 PANTHER FUCOSYLTRANSFERASE 2-RELATED 28 568 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre7g00087 571 Gene3D - 347 526 - -
Trre7g00087 571 Gene3D - 178 232 - -
Trre7g00087 571 FunFam Galactoside 2-alpha-L-fucosyltransferase 179 230 - -
Trre7g00087 571 MobiDBLite consensus disorder prediction 69 97 - -
Trre7g00087 571 Pfam Xyloglucan fucosyltransferase 91 539 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00087 Trre-Chr7 582004 584241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00087 95 567 Xyloglucan Fucosyltransferase1 AT2G03220 44.561 7.83e-144 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00087 K13681 - gmx:100818288 631.713