Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00086 ATGGTAGCATACTCTAAGAGACTCGAAATGTCCTTTATTGTGAGTTTGATAGCGTTTCATGCAATTATCATGGTTACTATAATGTACCAAAACTCTAGTTTTGGGCTATTTGAATGGTTTTCAAAAGGCATGTCAATGGGAGGAATGACTCATGCGAACGTTAAAGCTGGAGGACCAAATGTTACAATTATTGGATTGAGACAAAATGTAACACATGACAACTTTGGAAGAAGACACAAGAGTGATGCCAAATTCGAAAGCTCCAAAAATATTCCATTGGCAAATTCAACTTCAACTCCATCTAAAGAGATCAATGATGATGATAAAGATACATTGCTTGATGGATTATTAGTTTCTGGATTTGATGAAGCATCATGCATAAGCAGGTCACAATCACATTTCTACCACAAACCTTCTCCTCACAAACCTTCTCCATATTTGATATCTAAATTGAGAAAATATGAAGAACTTCATAGAAGGTGCGGACCTAACACTAGAGCTTACGATAAAGATATGAAAATTGTTGCAAACTATAAACAAAATGATACTAAATGTGCTTCAACAACATGCAAATATATTATTTGGGTACCTATAAATGGTTTAGGTAACCAAATAATTAGCATTGCTTCAACATTTCTTTACGCGCTCCTAACAGAGCGTGTTATGCTCGTACAATTTGGAAAAGACAAAAAAGGTTTATTTTGCGAACCATTTCTAAATTCTACTTGGTTGTTGTCGAAAGATTCTCCTTTTTGGAATACAAAAAATGTTCAAAGATATCAAAGAACAATTGAAATGGAAATGAATAATACATTGAATGAAGATTTGCCATTAGCTATGTTTGCAGATCTAAGTTATTCCTATACATTTGAAGAAAGATTCTTTCACTGTGATCACAGTCAATTTCTTCTCAATAAAATTCCTTTATTGTTTTTGAAATCAAGTACGTATTTTGCACCTTCGTTTTTCATGACACCTGTTTTTGAAAAAGAGTTAAATAAAATGTTCCCTGAAATAACATCAATTTTTCACCATTTGGGACGTTACCTTTTTCACCCTGCAAATGAAGCATGGGAACAAATCACAAATTTCTATCAACAACATCTTACTAAAGCAAATGAGAGAATAGGAATTCAAATAAGAGTTTATGATCCCAATTCAACTCCACACCAAGTTGTTATGAATCACATTTTGAATTGCACATTAGAGAATAAATTACTTCCAAAAGTACTTGGTACAAAAAATATATCATTGTCTACTTTGAGTGGAAAAAACAAGACAAATACAAAGGTTATTCTTGTGGCATCATTATATCCACAATATGGAAACAATTTAAGGACAATGTATCAGAATAAATCAACGGTTACCGATGAAGTAATTGAGGTTTATCAACCAAGTAGTGAAGAGCAACAAAAATTTGATGATACCAAGCATAATATGAAGGCTTGGGTGGATATGTATTTACTAAGTTTATCTGATGTGTTGGTGACTACATCTCAATCAACTTTTGGCTATGTTGCTAAGGCTTTGGGAAACTCAAGACCATGGATTCTTTACAATCCGGTTAATAATCAAACTAAGGAGATTTGTGAACGTGAGTTTACGGTGGAGCCTTGTCATAAATATCCTCCTTTACATTATTGCAATGGAACATCTATTGAAGATATTTCTTCTTCTTTTCATAATATTAGACATTGTAAAGATTTTCCTTTTGGTGTGAAGCTGGTTAACGGATTTGTTTAG 1743 0.3293 MVAYSKRLEMSFIVSLIAFHAIIMVTIMYQNSSFGLFEWFSKGMSMGGMTHANVKAGGPNVTIIGLRQNVTHDNFGRRHKSDAKFESSKNIPLANSTSTPSKEINDDDKDTLLDGLLVSGFDEASCISRSQSHFYHKPSPHKPSPYLISKLRKYEELHRRCGPNTRAYDKDMKIVANYKQNDTKCASTTCKYIIWVPINGLGNQIISIASTFLYALLTERVMLVQFGKDKKGLFCEPFLNSTWLLSKDSPFWNTKNVQRYQRTIEMEMNNTLNEDLPLAMFADLSYSYTFEERFFHCDHSQFLLNKIPLLFLKSSTYFAPSFFMTPVFEKELNKMFPEITSIFHHLGRYLFHPANEAWEQITNFYQQHLTKANERIGIQIRVYDPNSTPHQVVMNHILNCTLENKLLPKVLGTKNISLSTLSGKNKTNTKVILVASLYPQYGNNLRTMYQNKSTVTDEVIEVYQPSSEEQQKFDDTKHNMKAWVDMYLLSLSDVLVTTSQSTFGYVAKALGNSRPWILYNPVNNQTKEICEREFTVEPCHKYPPLHYCNGTSIEDISSSFHNIRHCKDFPFGVKLVNGFV 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00086 580 Gene3D - 187 241 - -
Trre7g00086 580 FunFam Galactoside 2-alpha-L-fucosyltransferase 188 239 - -
Trre7g00086 580 MobiDBLite consensus disorder prediction 78 106 - -
Trre7g00086 580 Pfam Xyloglucan fucosyltransferase 100 548 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre7g00086 580 Gene3D - 356 535 - -
Trre7g00086 580 PANTHER FUCOSYLTRANSFERASE 2-RELATED 34 577 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00086 Trre-Chr7 581977 584241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00086 104 576 Xyloglucan Fucosyltransferase1 AT2G03220 44.561 1.07e-143 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00086 K13681 - gmx:100818288 632.869