Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00085 ATGGAAGCAAGTTATACGAGCCTTAAAATGTCTTTTATTGTGTGTTTGATAGCTTTGCCTATAGTTATCATGGTTACTTTGATGTACCAAAACTCTAGTTTTGGGCTATTTGAAGGGTTTACAAAAGGGATGTCAATGGGAGGAATGACTCATGCGAACGTTGGAGCTGGAGTATCAAATGTTACAACTAATGAGTTTGAATTGAGACAAAATGTAACACATGAACACTTTAGAGGAAGACACAAGAGTGATAACATTTTCAAAAGCTCCAAAAATATCTCATTGACAAATTCAACCTCAACTTTATCTAAACATATCACTGGCGATGAAAAAGACAAATTGCTTGATGGACTATTAGTTTCTGGATTTGATGAAGCATCATGCATAAGCAGGTTACAATCACATTTCTACCACAAACCTTCTCCTCACAAACCTTCTCCATATTTGATATCTAAACTAAGAAAATATGAAGAACTTCATAGAAAATGTGGACCTAACACTAGAGCTTACAATAAAGACATGAAAATTATTGTAAACTCTAAGTCAAATGGTACTCATTGTGCTGCCACAACATGCAAATACATTATTTGGGTACCCGTAAATGGTTTAGGTAACCAAATAATTAGTATGGCTTCAACATTTCTTTACGCGATCCTAACGGAACGTGTAATGCTCGTACAAGGGAAAGACATAGAGGGTTTATTTTGTGAACCATTTCTAAATTCAACTTGGTTGTTGCCGAAAGATTCTCCTTTTTGGAATAATGAAAATAATAGGGAAAATGTTCAAGCATATCAAAGCACAATTGAGAAGGAAATGAATCATACATTGAATGAAGATTTGCCATCAACTATGTTTATGGATATGAAATTTACCGGTACATTTGAAGAGAGATTCTTTCACTGTGACCATAGCCAATTTCTTCTCAATAAAATTCCTTTATTGTCTTTGACATCAGGTCAGTATTTCGTACCTGCATTTTTTATGACACCAATTTTTCAAAAAGAGTTAAACAAAATGTTTCCAGAAGTAACCTCGATTTTTCACCATTTGGGACGTTACCTTTTTCACCCTTCAAATGAAGCATGGGAACAAATCACAAATTTCTATCAACAACACCTTGCTAAAGCAAATGAGAGAATTGGACTTCAAATAAGAGTTTTTAAACGCGATTCAACTCCTCAACAAGTTGTTATGAGTCAAGTTTTGAATTGCACATTAGAGAATAAATTGCTTCCAAAAGTACTTGATACGAAAAATATATCATTGTATTCTAGTGAAAAAAACAAGACAAATACTAAGGTCGTTCTTATGGCATCATTATATCCACAATATGGAAACAATTTAAAGACAATGTATCATAATAAATCAACAGTTACCGGGGAAGTAATTGAAGTTTATCAACCAAGTGGTGAAGAGCAACAAAAATTTGGTGATAACAAGCATAATTTGAAGGCATGGGTTGATATTTATTTACTAAGTTTATGTGATGTGTTGGTGACTACATATCAATCAACTTTTGGTTATGTTGCTAAGGGTTTGGGAAATTCAAGACCATGGATTCTTTACAATCCGGGTAATAATCAAAATAAGGAGATTTGTGAAGCTGAGTTTACAAAGGAGCCTTGCTATCATTATGCTCCTTTACATCATTGCAATGGAACGAAATTTAAAGATAATTATTCTTCTTTTCATAATATTAGACATTGTAAAGATTATCCTTTTGGTGTGAAGTTGATTAAAAGTTTTGTTTAG 1755 0.3311 MEASYTSLKMSFIVCLIALPIVIMVTLMYQNSSFGLFEGFTKGMSMGGMTHANVGAGVSNVTTNEFELRQNVTHEHFRGRHKSDNIFKSSKNISLTNSTSTLSKHITGDEKDKLLDGLLVSGFDEASCISRLQSHFYHKPSPHKPSPYLISKLRKYEELHRKCGPNTRAYNKDMKIIVNSKSNGTHCAATTCKYIIWVPVNGLGNQIISMASTFLYAILTERVMLVQGKDIEGLFCEPFLNSTWLLPKDSPFWNNENNRENVQAYQSTIEKEMNHTLNEDLPSTMFMDMKFTGTFEERFFHCDHSQFLLNKIPLLSLTSGQYFVPAFFMTPIFQKELNKMFPEVTSIFHHLGRYLFHPSNEAWEQITNFYQQHLAKANERIGLQIRVFKRDSTPQQVVMSQVLNCTLENKLLPKVLDTKNISLYSSEKNKTNTKVVLMASLYPQYGNNLKTMYHNKSTVTGEVIEVYQPSGEEQQKFGDNKHNLKAWVDIYLLSLCDVLVTTYQSTFGYVAKGLGNSRPWILYNPGNNQNKEICEAEFTKEPCYHYAPLHHCNGTKFKDNYSSFHNIRHCKDYPFGVKLIKSFV 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00085 584 Gene3D - 361 538 - -
Trre7g00085 584 Pfam Xyloglucan fucosyltransferase 99 552 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre7g00085 584 PANTHER FUCOSYLTRANSFERASE 2-RELATED 32 581 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre7g00085 584 Gene3D - 189 243 - -
Trre7g00085 584 FunFam Galactoside 2-alpha-L-fucosyltransferase 190 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00085 Trre-Chr7 576663 578850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00085 106 580 Xyloglucan Fucosyltransferase1 AT2G03220 45.094 2.70e-143 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00085 K13681 - gmx:100818288 638.647