Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00081 ATGGACAAAATAGTACATAGTTCCAAGAGATTCATCACAACATTCTTAGTTGTAATTTTCATAGCACTTCCTGTTTTTCTCATTGTTAACTTCATGTACTCAAACTCAAGCTTCTCTCTCTTTGAGGGATTAACAAAAGACAAGGTGCTACTTGTTGGAGAAAGTGAGCATGCTAACAACACTACAAATGTTACAACAAATATTGGAGGAAGAAGCCATAACAATTCAGATGATAACATAAAAGGAAGCTATAACAATATTGTCAACAATAACACCATGTCAAAGGTGCAAGGGAAAATTGAAAATGGTACTACAACAACAGAAGGAAGATCAGCTACAACCATAGGTTTGAAGAATGAGTCAATTACAAGTTCCACAAATGATTCAACAATACATAATATAATCCATGATGACAAAGAGAAATTTCTTGATGGACTTTTAGCTTCTGTCTTTGATGAAACATCATGCATAAGCAGGTTACAATCTCATTTATACCGCAAATCTTCGCCTCATAAACCTTCTTCGTATTTGATATCGAAACTACGCAACTATGAAGAAATTCATAGAAGGTGTGGACCTAATAGTAAAGCTTACAACAAAATCATGACAAAGATTCTTCATTCTAAGAACATTAAGGTTGATGGTGCTTCAATGTGCAAATACCTTATTTGGACACCGGCTAATGGTTTAGGAAACCAAATGGTTAGCATAGCTGCAACATTTCTTTATGCTCTTCTCACAAATCGCACGATGCTCGTACGATTCAGGAAAGACAAACAAGGTCTATTTTGTGAACCATTTCGAAATTCGACTTGGTTGTTACCAGAAAAATCTCCTTTTTGGAATGAAAATCATGTTGAAACATATCAAAGTGTGATAGAGAAGGAAAAAGCTAACAATAATTCAAAAGTGGATTTGCCATTAGCACTATTTCTCAATCTACAATACCAACCAAATTTTCATGAGAAATTCTTTCACTGTGATGATAGTCAAGCTCTTCTCATCAAAGTTCCTTTCTTGATTTTGCAATCAGATCAATATTTTGTACCTTCTCTTTTCATGACACCTTTTTTCAACAAGGAACTTGAAGCAATGTTCATCGAAAAAGACACGGTTTTTCACCATTTGGGACGATACCTTTTCCACCCTTCAAATTCGGCATGGAGACTAATCACAAATTTCTATCAAGCACACTTGGCTAAAGCAGATGAGAAAATAGGGCTTCAAATAAGAGTGTTTAATCCTAATTCAACTCCACAAGAAGTAGTTATGAATCTAGTTTTAAATTGCACTATACACAATAAATTACTTCCAAAAGTAATTGATATGAAAAATTCAATGTCTACTTCAAGCGACAAAAACAAGACGATTACGAAAGTCGTTCTTGTGGCGTCTTTATATCCAGAATATGGTGAGAATTTAAAGATGATGTATATGAATAAATCAACGGATACGGGGGAAGTAATTGAGGTTTATCAACCAAGTGGTGAAGAGCAACAAAAATTTAATGATAATAAGCATAATATGAAGGCTTGGGTTGATATGTATCTACTAAGTTTATCTGATGTGTTGGTTACTACTTCTTTGTCTACATTTGGATATGTTGCTCAAGGTTTGGGAAATTTGAGGCCATGGCTTCTTTACAAGCTTACAAATAATGAGACTCATTTTCCAGCTTGTGAAAGAGAGTTTTCAATGGAGCCTTGTTATCATGCTCCTCCTAAGCATTATTGTAGTGGAAAGGTTATACAAGATTTTGCTTCTTCATTCATTTATATGAGGAAATGTAAGGACTATTGGTTTGGTGTAAAGTTGGTTAATTAA 1824 0.3427 MDKIVHSSKRFITTFLVVIFIALPVFLIVNFMYSNSSFSLFEGLTKDKVLLVGESEHANNTTNVTTNIGGRSHNNSDDNIKGSYNNIVNNNTMSKVQGKIENGTTTTEGRSATTIGLKNESITSSTNDSTIHNIIHDDKEKFLDGLLASVFDETSCISRLQSHLYRKSSPHKPSSYLISKLRNYEEIHRRCGPNSKAYNKIMTKILHSKNIKVDGASMCKYLIWTPANGLGNQMVSIAATFLYALLTNRTMLVRFRKDKQGLFCEPFRNSTWLLPEKSPFWNENHVETYQSVIEKEKANNNSKVDLPLALFLNLQYQPNFHEKFFHCDDSQALLIKVPFLILQSDQYFVPSLFMTPFFNKELEAMFIEKDTVFHHLGRYLFHPSNSAWRLITNFYQAHLAKADEKIGLQIRVFNPNSTPQEVVMNLVLNCTIHNKLLPKVIDMKNSMSTSSDKNKTITKVVLVASLYPEYGENLKMMYMNKSTDTGEVIEVYQPSGEEQQKFNDNKHNMKAWVDMYLLSLSDVLVTTSLSTFGYVAQGLGNLRPWLLYKLTNNETHFPACEREFSMEPCYHAPPKHYCSGKVIQDFASSFIYMRKCKDYWFGVKLVN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00081 607 Pfam Xyloglucan fucosyltransferase 132 578 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre7g00081 607 Gene3D - 216 300 - -
Trre7g00081 607 FunFam Galactoside 2-alpha-L-fucosyltransferase 217 268 - -
Trre7g00081 607 PANTHER FUCOSYLTRANSFERASE 2-RELATED 11 607 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre7g00081 607 Gene3D - 389 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00081 Trre-Chr7 557155 559797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00081 133 606 Xyloglucan Fucosyltransferase1 AT2G03220 46.875 3.29e-152 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00081 K13681 - gmx:100809919 755.747