Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00080 ATGGAAACCTTTCAAGTTACTATGGACAAAATAGTACATAGTTCCAAGAGATTCATCACAACATTCTTAGTTGTAATTTTCATAGCACTTCCTGTTTTTCTCATTGTTAACTTCATGTACTCAAACTCAAGCTTCTCTCTCTTTGAGGGATTAACAAAAGACAAGGTGCTACTTGTTGGAGAAAGTGAGCATGCTAACAACACTACAAATGTTACAACAAATATTGGAGGAAGAAGCCATAACAATTCAGATGATAACATAAAAGGAAGCTATAACAATATTGTCAACAATAACACCATGTCAAAGGTGCAAGGGAAAATTGAAAATGGTACTACAACAACAGAAGGAAGATCAGCTACAACCATAGGTTTGAAGAATGAGTCAATTACAAGTTCCACAAATGATTCAACAATACATAATATAATCCATGATGACAAAGAGAAATTTCTTGATGGACTTTTAGCTTCTGTCTTTGATGAAACATCATGCATAAGCAGGTTACAATCTCATTTATACCGCAAATCTTCGCCTCATAAACCTTCTTCGTATTTGATATCGAAACTACGCAACTATGAAGAAATTCATAGAAGGTGTGGACCTAATAGTAAAGCTTACAACAAAATCATGACAAAGATTCTTCATTCTAAGAACATTAAGGTTGATGGTGCTTCAATGTGCAAATACCTTATTTGGACACCGGCTAATGGTTTAGGAAACCAAATGGTTAGCATAGCTGCAACATTTCTTTATGCTCTTCTCACAAATCGCACGATGCTCGTACGATTCAGGAAAGACAAACAAGGTCTATTTTGTGAACCATTTCGAAATTCGACTTGGTTGTTACCAGAAAAATCTCCTTTTTGGAATGAAAATCATGTTGAAACATATCAAAGTGTGATAGAGAAGGAAAAAGCTAACAATAATTCAAAAGTGGATTTGCCATTAGCACTATTTCTCAATCTACAATACCAACCAAATTTTCATGAGAAATTCTTTCACTGTGATGATAGTCAAGCTCTTCTCATCAAAGTTCCTTTCTTGATTTTGCAATCAGATCAATATTTTGTACCTTCTCTTTTCATGACACCTTTTTTCAACAAGGAACTTGAAGCAATGTTCATCGAAAAAGACACGGTTTTTCACCATTTGGGACGATACCTTTTCCACCCTTCAAATTCGGCATGGAGACTAATCACAAATTTCTATCAAGCACACTTGGCTAAAGCAGATGAGAAAATAGGGCTTCAAATAAGAGTGTTTAATCCTAATTCAACTCCACAAGAAGTAGTTATGAATCTAGTTTTAAATTGCACTATACACAATAAATTACTTCCAAAAGTAATTGATATGAAAAATTCAATGTCTACTTCAAGCGACAAAAACAAGACGATTACGAAAGTCGTTCTTGTGGCGTCTTTATATCCAGAATATGGTGAGAATTTAAAGATGATGTATATGAATAAATCAACGGATACGGGGGAAGTAATTGAGGTTTATCAACCAAGTGGTGAAGAGCAACAAAAATTTAATGATAATAAGCATAATATGAAGGCTTGGGTTGATATGTATCTACTAAGTTTATCTGATGTGTTGGTTACTACTTCTTTGTCTACATTTGGATATGTTGCTCAAGGTTTGGGAAATTTGAGGCCATGGCTTCTTTACAAGCTTACAAATAATGAGACTCATTTTCCAGCTTGTGAAAGAGAGTTTTCAATGGAGCCTTGTTATCATGCTCCTCCTAAGCATTATTGTAGTGGAAAGGTTATACAAGATTTTGCTTCTTCATTCATTTATATGAGGAAATGTAAGGACTATTGGTTTGGTGTAAAGTTGGTTAATTAA 1845 0.3425 METFQVTMDKIVHSSKRFITTFLVVIFIALPVFLIVNFMYSNSSFSLFEGLTKDKVLLVGESEHANNTTNVTTNIGGRSHNNSDDNIKGSYNNIVNNNTMSKVQGKIENGTTTTEGRSATTIGLKNESITSSTNDSTIHNIIHDDKEKFLDGLLASVFDETSCISRLQSHLYRKSSPHKPSSYLISKLRNYEEIHRRCGPNSKAYNKIMTKILHSKNIKVDGASMCKYLIWTPANGLGNQMVSIAATFLYALLTNRTMLVRFRKDKQGLFCEPFRNSTWLLPEKSPFWNENHVETYQSVIEKEKANNNSKVDLPLALFLNLQYQPNFHEKFFHCDDSQALLIKVPFLILQSDQYFVPSLFMTPFFNKELEAMFIEKDTVFHHLGRYLFHPSNSAWRLITNFYQAHLAKADEKIGLQIRVFNPNSTPQEVVMNLVLNCTIHNKLLPKVIDMKNSMSTSSDKNKTITKVVLVASLYPEYGENLKMMYMNKSTDTGEVIEVYQPSGEEQQKFNDNKHNMKAWVDMYLLSLSDVLVTTSLSTFGYVAQGLGNLRPWLLYKLTNNETHFPACEREFSMEPCYHAPPKHYCSGKVIQDFASSFIYMRKCKDYWFGVKLVN 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00080 614 Gene3D - 223 307 - -
Trre7g00080 614 FunFam Galactoside 2-alpha-L-fucosyltransferase 224 275 - -
Trre7g00080 614 Gene3D - 396 564 - -
Trre7g00080 614 PANTHER FUCOSYLTRANSFERASE 2-RELATED 18 614 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre7g00080 614 Pfam Xyloglucan fucosyltransferase 139 585 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00080 Trre-Chr7 557134 559797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00080 140 613 Xyloglucan Fucosyltransferase1 AT2G03220 46.875 2.31e-152 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00080 K13681 - gmx:100809919 764.992