Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g03440 ATGGTTGTGATCAGCGACGAAACCGAGCCTTATGGAGACGAAGAGGAAACAGAAACAGAAAGTGTGGACTATGAGGAGCTGAAGAAACGTATGTGGAAGGACAAGATCTTACTACAAAGGATGAAGGAAAAACAAGACAAGAATAATGAACCAGAGGTACAAGCAAAACAAGAAGCATCAAGGAGGAAAAAGATGTCAAGAGCACAAGATTCGGTGCTCAAATACATGGCGAAAATCATGGATGTTTGCAAAGCCAAAGGTTTTGTTTACGGGATTATCCCCGAAAAAGGTAAGCCAGTATCAGGTTCATCTGATAGTTTACGCGAATGGTGGAAAGATCAAATCCGTTTTGATCATAGCGCGCCACTTGCAGTTGCGAAATACTTGCCACTTCTTGAACAAGACGAACAATTTAATACTATGATAGCTGATCCAAATTCTTACATACACTACACCTCCTCCAAGATTTACAAGATTCAACTCTGGGTTCGCTTCTTTCTGCTTTAA 507 0.4083 MVVISDETEPYGDEEETETESVDYEELKKRMWKDKILLQRMKEKQDKNNEPEVQAKQEASRRKKMSRAQDSVLKYMAKIMDVCKAKGFVYGIIPEKGKPVSGSSDSLREWWKDQIRFDHSAPLAVAKYLPLLEQDEQFNTMIADPNSYIHYTSSKIYKIQLWVRFFLL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g03440 168 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 8 131 IPR006957 GO:0003700|GO:0005634
Trre6g03440 168 MobiDBLite consensus disorder prediction 40 67 - -
Trre6g03440 168 MobiDBLite consensus disorder prediction 1 22 - -
Trre6g03440 168 Gene3D - 54 134 IPR023278 GO:0003700|GO:0005634
Trre6g03440 168 Pfam Ethylene insensitive 3 25 133 IPR047091 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g03440 Trre-Chr6 34105039 34105545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g03440 7 160 EIL Transcription Factor Family AT2G27050 50.000 4.19e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trre6g03440 EIN3 4.1e-46 No_clan