Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01116 ATGGTCAAAAACTCACTCTATTTCCTTAATGAATTTGTCCAATTTAAGGTGCAAGGGAAAATTGAAAATGGTACTACAACAAAAGAAGAAAGATCAGCTACAACTATAGGTTTGAAGAATGAGTCAATTACAAGTTCCACAAATGATTCAACTATACATAAAGTAATCCATGATGACAAAGAGAAATTTCTTGATGGACTTTTAGCTTCTGTATTTGATGAAACATCATGCATAAGCAGGTTACAATCTCATTTATACCGCAAATCTTCGCCTCATAAACCTTCTTCGTATTTGATATCGAAACTACGCAAATACGAAGAAATTCATAGAAGGTGTGGACCTAATAGTAAAGCTTACAACAAAATCATGACAAAGATTCTTCATTCTAAGAACATTAAGGTTGATGATGCTTCGATGTGCAAATACCTTATTTGGACGCCGGCTAATGGTTTAGGGAACCAAATGGTTAGCATAGCTGCAACATTTCTTTATGCTCTTCTCACAAACCACACGATACTAGTGCGATTCAGGAAAGACAAACAAGGTCTATTTTGTGAACCATTTCTAAATTCGACTTGGTTGCTACCAGAAAAATCTCCTTTTTGGAATGAAAATCATGTTGAAACATATCAAAGTGTGATAGAGAAGGAAAAAGCTAACAATAATTCAAAATTGGATTTGCCATTAGCACTATTTCTCAATCTACAATACCAACCAAATTTTCATGAGAAATTCTTTCACTGTGATGATAGTCAAGCTCTTCTCATCAAAGTTCCTTTCTTGATTTTGCAATCAGATCAATATTTTGTACCTTCTCTTTTCATGACACCTTTTTTCAACAAGGAACTTGAAACAATGTTCGTTGAAAAAGACACGGTTTTTCACCATTTGGGACGATACCTTTTCCACCCTTCAAATTCGGCGTGGAGACTAATCACAAATTTCTATCAAGCACACTTGGCTAAAGCATATGAGAAAATAGACCTTCAAATAAGAGTGTTTAATCCTATTTCAACTCCACAAGAAGTAGTTATGAATCTAGTTTTAAATTGCACTATACACAATAAATTACTTCCCAAAGTAATTGATGTGAAAAATTCAATGTCTACTTCAAGTGACAAAAACAAGACGATTACGAAAGTTGTTCTTGTGGCGTCTTTATATCCAGAATATGGTGAGAATTTAAAGATGGTGTATATGAATAAATCAACGGATACCGGAGAAGTAATTGAGGTTTATCAACCAAGTGGTGCAGAGAAACAAAAATTTAATGATAATAAGCATAATATGAAGGCTTGGGTTGATATGTATCTACTAAGTTTATCTGATGTGTTGGTTACTACTTCTTTGTCTACATTTGGATATGTTGCTCAAGGTTTGGGAAATTTGAGGCCATGGCTTCTTTACAAGCTTACAAATAATGAGACTCACTTTCCAGCTTGTGAGAGAGAGTTTTCAATGGAGCCTTGTTATCATGCTCCTCCTAAGCATTATTGTAGTGGAAAGCTTATACAAGATTTTGCTTCTTCATTCATTTATATGAGGAAATGTAAGGACTATTGGTTTGGTGTAAAGTTGGTTAATTAA 1587 0.3403 MVKNSLYFLNEFVQFKVQGKIENGTTTKEERSATTIGLKNESITSSTNDSTIHKVIHDDKEKFLDGLLASVFDETSCISRLQSHLYRKSSPHKPSSYLISKLRKYEEIHRRCGPNSKAYNKIMTKILHSKNIKVDDASMCKYLIWTPANGLGNQMVSIAATFLYALLTNHTILVRFRKDKQGLFCEPFLNSTWLLPEKSPFWNENHVETYQSVIEKEKANNNSKLDLPLALFLNLQYQPNFHEKFFHCDDSQALLIKVPFLILQSDQYFVPSLFMTPFFNKELETMFVEKDTVFHHLGRYLFHPSNSAWRLITNFYQAHLAKAYEKIDLQIRVFNPISTPQEVVMNLVLNCTIHNKLLPKVIDVKNSMSTSSDKNKTITKVVLVASLYPEYGENLKMVYMNKSTDTGEVIEVYQPSGAEKQKFNDNKHNMKAWVDMYLLSLSDVLVTTSLSTFGYVAQGLGNLRPWLLYKLTNNETHFPACEREFSMEPCYHAPPKHYCSGKLIQDFASSFIYMRKCKDYWFGVKLVN 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01116 528 Gene3D - 359 478 - -
Trre6g01116 528 PANTHER FUCOSYLTRANSFERASE 2-RELATED 48 528 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre6g01116 528 Gene3D - 137 192 - -
Trre6g01116 528 Pfam Xyloglucan fucosyltransferase 55 499 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01116 Trre-Chr6 8622548 8624134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01116 55 527 Xyloglucan Fucosyltransferase1 AT2G03220 45.929 1.38e-145 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01116 K13681 - gmx:100809919 701.434