Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00536 ATGGATCCCAAAGTTGATAATGGTTTTGTCACTGGCCCTTCAAAGGGAGAAGCCTCAAACAAGGCAAAAAAAGAAAAAGGAAAGAAAAAAGAAAAGGAAGAAGGTGGTGATGAGAAAAAAGAGTTAGATATTGAGGAACTAGAGAAAATGATATGGAGACATAAAAAGCAGTTAAGGAGGTTGAAGGAAGAAAGAGCACAAAGAGAGTATAATTATTCATTGAAACAATTGGAACAATTGAAAAGAAAAACATTGTCTCGTGCACAAGATGGTGTATTAAGGTACATGTTAAAGATGGTGGAATTATGTAATGCTCAAGGATTCGTGTATGGTATAGTACTTGAAGATGGAAAAACAGTAAGTGGATCATCGGAAAATTTACGAGCTTGGTGGAAGGAAGAAGTGAAGTTTGATAAAAACATTTCAGCTGCAATTTCGAAGTATAATGAAGAAAATGGAATTTCATCAGAGAATGGGGCTAATTGCAGTAGAGTTGATTCACTTGTTGAGAATACTAGTCTTCCTCATGATCATGGAAGTGCTTTTGTTGAAAGTAGTGGAGAATGGAGACAAGTTCAAGTTCAACCAAATTTCAATAGTGATGATGTGTCTCCAATGAACAATCTTGTTGAAAGTGATGGAAAATGGAGACAAGTTCAAGTTCAACCAAATTTCAATAGTGTTGATGTGTCTCCAATGAACAATCTTGTTGAAAGTGATGGAGAATGGAGACAAGTTCAAGTTCAACCAAAGTTCAATAGTGTTGATGTGTCTCCAATTAACAATCTTGTTGAAAGTGGTGGAGAATGGAGACAAGTTCAAGTTCAACCAAATTTCAATAGTGATGATGTGTCTCCAATGAACAATCTTGTTGAAAGTGGTGGAGAATGGAGACAAGTTCAACCAAATTTCAATGTGTCTCCAATGAACAATCTTGATGAAAGTGGTGGTAATAAGAGAAAGGTTGATGAACTTGTTGAAAGCACAACTACTACAAAAAACAATGAGGGCTATACTTGTATTAATCCTCAACTTCAATACTATAATCAAGGAGGTGATGTTAACAATTCATCACATACTAACTTTTCTTCTATTATTCCACCTTATGAGGTTGCTAACAAGAGAAAATGTGAAGTTGGTATGAGATGTAGCAACCAATTGCAACAAGATATGAATGTAAGAAACAATCACCACTTTGCCAGCCCAACAATAGGAAGCAGCAGCAGCATCAATAACAACCAATTGCAAATGGTTGATGTTGGAGGATCAAACACTCATCAACATGCTGCACCTCTTGATCAACATGTGCAAGTTGCACTACCTGTTGTTGAAGATCATACAGGTAATTACTCTGGAGGAGGAGGAGGAGAAGGGGATTTGATGGATATTTATTATTCGGGTATTCGGCTGAAGAATAATAATACCACTATGAGTGATGCTGTGCCGGTTGGAGCTCATGGAAACCCTAACTCCTCTTCTAACTACCAAGTGCCTAATGCTGTTGTTGGAGCTACTATTCCAATGCATGAAAGTGTGTCAACAGCAACCATTGAAGATTTGCGGGCATACAATTCTCCATTTGATGTTGAAGATTACAACAATTATGGATTTAGTGGCTCTTCTTCTAATGTGGAAACACCAAGTTATGATTTCTCTTGGTTCTACAATAAAGAGAATTAA 1680 0.3679 MDPKVDNGFVTGPSKGEASNKAKKEKGKKKEKEEGGDEKKELDIEELEKMIWRHKKQLRRLKEERAQREYNYSLKQLEQLKRKTLSRAQDGVLRYMLKMVELCNAQGFVYGIVLEDGKTVSGSSENLRAWWKEEVKFDKNISAAISKYNEENGISSENGANCSRVDSLVENTSLPHDHGSAFVESSGEWRQVQVQPNFNSDDVSPMNNLVESDGKWRQVQVQPNFNSVDVSPMNNLVESDGEWRQVQVQPKFNSVDVSPINNLVESGGEWRQVQVQPNFNSDDVSPMNNLVESGGEWRQVQPNFNVSPMNNLDESGGNKRKVDELVESTTTTKNNEGYTCINPQLQYYNQGGDVNNSSHTNFSSIIPPYEVANKRKCEVGMRCSNQLQQDMNVRNNHHFASPTIGSSSSINNNQLQMVDVGGSNTHQHAAPLDQHVQVALPVVEDHTGNYSGGGGGEGDLMDIYYSGIRLKNNNTTMSDAVPVGAHGNPNSSSNYQVPNAVVGATIPMHESVSTATIEDLRAYNSPFDVEDYNNYGFSGSSSNVETPSYDFSWFYNKEN 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00536 559 MobiDBLite consensus disorder prediction 18 40 - -
Trre6g00536 559 Pfam Ethylene insensitive 3 45 164 IPR047091 GO:0003700
Trre6g00536 559 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 30 157 IPR006957 GO:0003700|GO:0005634
Trre6g00536 559 Coils Coil 44 83 - -
Trre6g00536 559 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00536 Trre-Chr6 3967160 3971014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00536 41 154 EIL Transcription Factor Family AT3G20770 56.410 6.09e-37 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trre6g00536 EIN3 4.3e-41 No_clan