Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05628 ATGGCAGCTGTTGAGGGACAGGTTATCGGAGTTCACAGTGATGCGGCTTGGAAGGAACATATCGAGAAGGGAAAAGAGTCTAAGAAACTGATTGTTGTTGATTTTACTGCTTCTTGGTGTGGCCCGTGCCGTTTCATTGCCCCAATTTTGGCAGAGATTGCTAAAACCCTTCCACATGTCACCTTCCTTAAGGTTGATGTTGATGAATTGAAGGCTGTTGCTGAGGAGTGGGGAGTTGAAGCTATGCCAACCTTCCTGTTCTTGAAAGAAGGAAAAGTTGTGGACAAGGTTGTGGGTGCTCAGAAGGAGCAGCTGCAATTGACAATATCCAAGCATGCAACTGCTGATGCTTGA 354 0.4633 MAAVEGQVIGVHSDAAWKEHIEKGKESKKLIVVDFTASWCGPCRFIAPILAEIAKTLPHVTFLKVDVDELKAVAEEWGVEAMPTFLFLKEGKVVDKVVGAQKEQLQLTISKHATADA 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05628 117 FunFam Thioredoxin 7 114 - -
Trre5g05628 117 Gene3D Glutaredoxin 1 116 - -
Trre5g05628 117 PANTHER THIOREDOXIN 8 111 - -
Trre5g05628 117 ProSiteProfiles Thioredoxin domain profile. 1 114 IPR013766 -
Trre5g05628 117 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
Trre5g05628 117 SUPERFAMILY Thioredoxin-like 5 112 IPR036249 -
Trre5g05628 117 NCBIfam thioredoxin 23 112 IPR005746 GO:0015035
Trre5g05628 117 CDD TRX_family 19 104 - -
Trre5g05628 117 PRINTS Thioredoxin family signature 78 89 - -
Trre5g05628 117 PRINTS Thioredoxin family signature 39 48 - -
Trre5g05628 117 PRINTS Thioredoxin family signature 31 39 - -
Trre5g05628 117 Pfam Thioredoxin 11 110 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05628 Trre-Chr5 56427498 56428567 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05628 5 56427498 56428567 Trre5g05628 5 56427498 56428567 ECH
Trre1g00145 1 1124301 1126220 Trre5g05628 5 56427498 56428567 PCT