Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05573 ATGTCTCATCATACTTCTGCCACCGCCCTCCACATCTCCACCGCTCCTCCTTTTCAGATCTCCAAAGATTTTCATGGCTCTGACAATCCTATTCCACTCTCACCTCAGTGGCTTCTGTCAAAGCCAGGGGACGGAAAACCTGGAGCAGGAACTGTGGAAAACCATGTGATCTCAACTCCATCATTTGGGAATCGCTCAGAGACTGTCAAGACGTCTGGAAATGGAGAGGATGTGCGTGATGACCATAAGAGAAAGGATGTCTTTAGGCCATCTGTACTTGACTCTGAAAGTGGACGTCATGACCGTTGGCGTGATGAAGAGCGAGACACCAAGTCCTCTGTACGCAAGGATCGATGGAGGGATGGTGACAAGGTCTTAGGTGATGGTCAGAGAAGGGACCGATGGGTGGATAACCCATCCACAAAGAACTTCGGAGAGACACGTCGTAGTACATCTGATAGATGGAATGATTCAGGTAATAGGGAAATGAATTTTGATCAGCGGCGTGAAAATAGGAGGACAACACGCTGGGGTCGTGATGAGAAGGAGCCTGAAGTTTTTCAAGAGAAACAGAACGAATCTGGTAAAAATGGTGATCCGCATCTGGACAAAGTTTTGTCTCACAGTTCCAATCCTGGTAAGGATGAAAAGGAAAGGAAGATAGAGCCATGGAGACCTAGCTCCTTACAAAGACGTGCGAAGATAGAGGCATCCAATCAGCACAATGTGACACCCAGCAAACAAGTGCCTATATTGTCTTCTGGGCGGGGCCACGGGGAGGATACACTTCCAGTTGCAAATCCTGGACGTGGCCGGTTTGGCTCTGGTGGGAGCTCTATAAATAGCTCGTATATGCATTCTCAATATCCTCAAACTGGATTGGATAAAATTGAAAGTGAGCGTGGAGAAGCTCATCCATTTAGATATAGTAGGACTAATATCCTTGATGTGTACAAAGTGATTGATGTGCATACAGCTATAAAACTAGTCGATGATTTTGCGCAGGTTCCTCCTTTTACACAAGACGAACCATTGGAGCCTCTAGCTCTCTGTGCACCAACTTCTGAGGAACTGACCGTCTTAAAGGGTATTGACAAAGGAGAAATAATTAGTAGCAGTGCACCTCAGGGGCCAAAAGATGGAAGGAACTCAACAGAGTTTACACATTCAAGACAAATGAAGCATGGAAATGCACCTCTCCAAGATAGAGGTGAAGATGGAGGTTCTTATAAAGTAGCCGATGAGGTGCATAGTAACAGAGAATCAGCCTTTGAAGAAAATAATTCTGTTCGTCCTAGTACTGGATGGCATGCCACATCATTGGGCGAACAAGCAAGCAGTCTCATGCATGATAGCAAAGATGTGCCTAGTGATGTCAGGTCAAGACACTCAGATATGAAGTCGCCACACCAGCCAAAAGATTTTCGTACTCAGTGGGAAAATAATCTGGACTATTCATCCGACGCCATAGATGTAGCTAAATGGCAATCTGGCGAAAATTCAATTGTTAAAAGGCAACTAACTGGCTTTTTGGATGGTGAACTTGAAACCAGGAAAGTTCCGCAGACTTCTCCAGAGGAATTATCCCTTTTCTATAAAGATCCTCGAGGTCAAGTTCAAGGTCCATTCAAAGGAATTGATATTATTGGATGGTTCGAGGCTGGATATTTTGGTATTGATTTACTAGTTCGTTTGGAAAGCGCAGCAGCTGACTCGCCATGGTTCCAACTTGGTGATGTCATGCCTCATTTACGAGCTAAAGCCCGACCACCACCTGGGTTCCCTGCAGCAAAACTTGACACTACAGAGGCACCTGTTCGGCAAAGTTCCAGTACCTTTGGGAATATTCCTACTGGGCCAGGTGGGGTTGAGATGTTGAGAAATAATTCCATGCACAGACTGGGTTCTGCTACTGAAGCTGAAAATAGGTTTTTGGAGTCACTCATGTCTGGTAGCAAGAGCAGTTCCCCACTTGAAAACATGACATTATCAGAAGGAATACAAGGGTTTATTGGAAACAATTCTGGCAATTTGGGCCCATCAGGAGTTGATGGTGGAAACAACCCATACCTTCTGGCCCAGAGGATGGCACTTGAACGACAGAGGTCCTTACCAAATCCTTATCCATATTGGCCAGGGATTGATGCAGGATCCCTTCCGCCAAAATCAGACATAGTTCCAGATGCATCACCGCATTCACAAATCATGTCTTCATTGAGCGGCAATTCTCGACAGCTTCAGTCCCAAAATTCTGAGTTGAACTCAGTTATCCATGGATTATCCGACAGGGGATCCACAGGCTTAAATAATGGTGTTACCAGCTTGTCAAATTATCCCTTACAAGGTGGATTGAACCCGCTTCAGAATAATATTGACTTACATCGTGATCAAAATTTTATACCATTTGGAATTCAACAACAAATGTATCAAGCACCGAACCAATTTTCTTTAAATAACTTAATAGCTCAAACTGCAGATAACCCTTCTAGTATTTTGGCAGCAGAACAGTTGTTTTCTTCCAGTTTGTTGCAGGATCCCCAGATGGTGAATATGTTGCAACAGCAATACTTGCTGCAGTTGCATTCTCAGGCAACTACTCCTTCACAGCATATGCCTTTATTAGATAATCTCCTATTTTTGAAGCAGCAGGAGGAGCAACAGCTGTTAATGCGCCAACAACAGCAATTGCTTTCTCAAGTGCTGCAGGGGCCTCATTCTCACCAGCCCTTTGGTGATTTATCTTATGGACAAATGCAGGCTGGTGGAATGCAAATGGGGAATTTGCATGTGGAACCATCTCAACATCAACCATCCCATGACATTTTTCATATGAGTTCTCAGACACCAGTTCCTAGTGTGCATGATGAGCTTAGTACCATGTCTCTGAATTTATCTCTGCAAGAAAGCCAAGAGACAAGCTTTAATAAAAACATTGAATCTTCTGTACAGCTGCCCCATCAATTGTTTGGGAATATTAATCACCAAAAAAGTTGGGACACTACTATTCCTAAGCAAATTAATGAAGAGTACCAGAAGGAAACATCACCTGCATCCACTTCTGTTGAAAGTTTCTTATTGCATGAGCAGAATAGGACCACAGAAGAACCTAATATTGCACAGAAACCTTTTTCCGCTTCTGACTCTACTGTTGAATATGTGGAGCAGATGTCAGATAACAATGGCAGGGCTGATGATACTCCTGTGAATGCCATTTCAGAGTCTGGTGAGCATTCCAAACCTGTTCTGTGTGTTGAACCTGTTATTGCAGCGCCTTTGGCTGAATATTGTGAGATCGAGTTACCACCGGCAGGTCAACTGGGTACGGATGTGAAAATTAAACCAGTTAGTGTCGAAGAACAGGTAAATGGAAGAGACATCTCAAATGTTGAGCCATCTGTGGTGGGTGTAAGAGATATTGAAGTGCGAGAACCCAAAAAGGCTACTGAGAAAAAATCAAAGAAACAAAAATCTTCCAAATCCCAATCTTCTGGTCAAGCAAAGGGATTGCCAAAAAATGCGACTTTGCAGCAGTCAAATAATTCAGAACCTGAAAAGTCAAATTATAGTGAAATCAATTTGAAGGAAATCAATAGGGATGAAGGAGATTATGAAACACGTCTCAAACAAACAAGTGGTGAAGACAGTTTATCTAGAACTGCTATCACAAAGGCAGTAGTTCATCAAGAAGTTAGTGATCTCCCTGCTAATGTTCGAGAAAGCATCACTGAAACAGTTGTTGAGAATGACTCAAAGTCATTAAGTTCGGTTGCCATACAGACTACTGAATTGCCTGCAGGGAGAGCTTGGAAACCTGCTCCTGGTTTCAAGGCGAAGTCTTCATTAGAAATTCAACAGGAAGAACAGAAAAAGGCAGAGACAGAGATGCCTGTAATTGAAGTTGCTACTACTGTCAACTCCCTCAGTGTGACTACTCCCTGGGTTGGAGTTGTGGCCAATCCAGACTCTACAAAAGTGTCTAGTCAAAATCACAAAGAAGCAGGTAGTACTGAAAATCTGGTCAAAACCAAAACTTCTCAAAACAGCAAGAGCAAGAAAAGTCCATTGCATGATCTATTAGCAGAAGACGCAGAGATTTTTAATGAAAGAGATAGCACAGGTCCAGAAAGTATATCATTCTCACAATATATAGCTGCTGCTGCTGCCCATTCAGAACCAATTGATGACGGAGACTTCATTGAAGCTAAAGACACTAAAAGGAGCCGGAAAAAATCTACAAAATCAAAGGGTTCAGGGTCTAAGATCTCAAAGCCAGTTGCTTCCAGTGAAACACCAATAAGTTCAAGCCCCGTTGAAAAGGGAAAAAGCTCCCGCTCTGTGCAGCAGGAGAAAGAACAACTGTCTACTATACCTTCAGGACCTTCTCTGGGAGATTTTGTTATTTGGAGAGGAGAGCCAACAAGTCCATCTCCTTCTCCAGCTTGGACAACTGATTCTGGCAGGGTTCCCAAACCACTGTCATTAAGGGACATTCTAAAGGAACAGGAGAAGAAGTCTTCTTCTGCAGTTCCCCCAAACCAATTTCATACGCCTCAGAAATCACAGCCTGCCCAAGCTGCTCAGAGTAGTGTTCCTTCACGGACACTTTCAGCTCCGTCAAAAGCTGCATCTTCTAGCCACATAAACTCCCAAGCTTCTCATTCAAAAAACAGAGGGGATGACGACATGTTCTGGGGTCCAATTGAGCAATCTAAGCTAGAAACTAAGCAGTCCAATTTCCCTCAGCTTGCAAGCCAGGGGAGTTGGGGTTCCAAAAACGTTCCCATGAAAGGTAATTCACCTGGATCATTAAGCCGTCAAAAATCAGGGAGTAGCAAACCAACTGAGCGATTGCTGTCGTCATCACCTGTCTCTTCTCAATCATTGCTCAAATTAAAAAAAGATGTCATGACTAGGAACTCTGAAGCCACGGACTTCAGAGTCTGGTGTGAGAATGAATGTGTGAGGCTTATTGGGACAAAAGATACAAGTTTCCTTGAGTTTTGCTTGAAGCAATCAAGATCCGAAGCAGAGATGTTTCTGATAGAAAACCTTGGATCATATGACCCTGATCACAAATTCATTGATAAATTCCTCAATTACATGGAGTTACTGCCATCTGAAGTTTTGGAAATAGCTTTTCAGACTCAGAATGATTGGAAAGTTGCTGGAGGCGTGATATCTGGAAATACAAATTTACAAGATATCGGACAGACTGATGGATCCTCCTCAAAAAGTGGAAAGAAGGGTAAGAAAGGGAAAAAGGTCAGTGCTTCAGTTTTGGGATTCAATGTCGTAAGTAACCGGATTATGATGGGTGAGATCCAGACAGTAGAAGACTAA 5340 0.4328 MSHHTSATALHISTAPPFQISKDFHGSDNPIPLSPQWLLSKPGDGKPGAGTVENHVISTPSFGNRSETVKTSGNGEDVRDDHKRKDVFRPSVLDSESGRHDRWRDEERDTKSSVRKDRWRDGDKVLGDGQRRDRWVDNPSTKNFGETRRSTSDRWNDSGNREMNFDQRRENRRTTRWGRDEKEPEVFQEKQNESGKNGDPHLDKVLSHSSNPGKDEKERKIEPWRPSSLQRRAKIEASNQHNVTPSKQVPILSSGRGHGEDTLPVANPGRGRFGSGGSSINSSYMHSQYPQTGLDKIESERGEAHPFRYSRTNILDVYKVIDVHTAIKLVDDFAQVPPFTQDEPLEPLALCAPTSEELTVLKGIDKGEIISSSAPQGPKDGRNSTEFTHSRQMKHGNAPLQDRGEDGGSYKVADEVHSNRESAFEENNSVRPSTGWHATSLGEQASSLMHDSKDVPSDVRSRHSDMKSPHQPKDFRTQWENNLDYSSDAIDVAKWQSGENSIVKRQLTGFLDGELETRKVPQTSPEELSLFYKDPRGQVQGPFKGIDIIGWFEAGYFGIDLLVRLESAAADSPWFQLGDVMPHLRAKARPPPGFPAAKLDTTEAPVRQSSSTFGNIPTGPGGVEMLRNNSMHRLGSATEAENRFLESLMSGSKSSSPLENMTLSEGIQGFIGNNSGNLGPSGVDGGNNPYLLAQRMALERQRSLPNPYPYWPGIDAGSLPPKSDIVPDASPHSQIMSSLSGNSRQLQSQNSELNSVIHGLSDRGSTGLNNGVTSLSNYPLQGGLNPLQNNIDLHRDQNFIPFGIQQQMYQAPNQFSLNNLIAQTADNPSSILAAEQLFSSSLLQDPQMVNMLQQQYLLQLHSQATTPSQHMPLLDNLLFLKQQEEQQLLMRQQQQLLSQVLQGPHSHQPFGDLSYGQMQAGGMQMGNLHVEPSQHQPSHDIFHMSSQTPVPSVHDELSTMSLNLSLQESQETSFNKNIESSVQLPHQLFGNINHQKSWDTTIPKQINEEYQKETSPASTSVESFLLHEQNRTTEEPNIAQKPFSASDSTVEYVEQMSDNNGRADDTPVNAISESGEHSKPVLCVEPVIAAPLAEYCEIELPPAGQLGTDVKIKPVSVEEQVNGRDISNVEPSVVGVRDIEVREPKKATEKKSKKQKSSKSQSSGQAKGLPKNATLQQSNNSEPEKSNYSEINLKEINRDEGDYETRLKQTSGEDSLSRTAITKAVVHQEVSDLPANVRESITETVVENDSKSLSSVAIQTTELPAGRAWKPAPGFKAKSSLEIQQEEQKKAETEMPVIEVATTVNSLSVTTPWVGVVANPDSTKVSSQNHKEAGSTENLVKTKTSQNSKSKKSPLHDLLAEDAEIFNERDSTGPESISFSQYIAAAAAHSEPIDDGDFIEAKDTKRSRKKSTKSKGSGSKISKPVASSETPISSSPVEKGKSSRSVQQEKEQLSTIPSGPSLGDFVIWRGEPTSPSPSPAWTTDSGRVPKPLSLRDILKEQEKKSSSAVPPNQFHTPQKSQPAQAAQSSVPSRTLSAPSKAASSSHINSQASHSKNRGDDDMFWGPIEQSKLETKQSNFPQLASQGSWGSKNVPMKGNSPGSLSRQKSGSSKPTERLLSSSPVSSQSLLKLKKDVMTRNSEATDFRVWCENECVRLIGTKDTSFLEFCLKQSRSEAEMFLIENLGSYDPDHKFIDKFLNYMELLPSEVLEIAFQTQNDWKVAGGVISGNTNLQDIGQTDGSSSKSGKKGKKGKKVSASVLGFNVVSNRIMMGEIQTVED 1779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05573 1779 PANTHER GYF DOMAIN-CONTAINING PROTEIN 6 1779 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1 271 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1 15 - -
Trre5g05573 1779 Gene3D - 515 599 IPR035445 -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 729 750 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1320 1356 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 445 474 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 603 617 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1505 1552 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 453 474 - -
Trre5g05573 1779 Pfam GYF domain 531 568 IPR003169 GO:0005515
Trre5g05573 1779 MobiDBLite consensus disorder prediction 147 229 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1390 1623 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1417 1459 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 232 251 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1058 1077 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1320 1353 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1137 1197 - -
Trre5g05573 1779 ProSiteProfiles GYF domain profile. 527 578 IPR003169 GO:0005515
Trre5g05573 1779 MobiDBLite consensus disorder prediction 54 71 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1570 1623 - -
Trre5g05573 1779 CDD GYF 527 584 IPR003169 GO:0005515
Trre5g05573 1779 MobiDBLite consensus disorder prediction 396 410 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1058 1073 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 72 139 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1733 1752 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 369 410 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1158 1187 - -
Trre5g05573 1779 SUPERFAMILY GYF domain 519 584 IPR035445 -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1137 1156 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 602 621 - -
Trre5g05573 1779 MobiDBLite consensus disorder prediction 730 750 - -
Trre5g05573 1779 SMART gyf_5 528 583 IPR003169 GO:0005515
Trre5g05573 1779 MobiDBLite consensus disorder prediction 1393 1407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05573 Trre-Chr5 56088467 56096338 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05573 5 56088467 56096338 Trre5g05573 5 56088467 56096338 ECH
Trre1g00206 1 1499349 1508626 Trre5g05573 5 56088467 56096338 PCT