Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05567 ATGGAGAGAATTTATTCCTATCCTGAACAACGAGAGAGTATTCTGTTAGGATATGACGACGACCCGAGCACGTCAGAGAGGAAATCGGACGTTGATTTTAACGACGTGTTTGGTGGTCCACCACGGCGCAGGTCATCCGTAAATGAATCGGTAAGTGGAGAGGAAAGTGAAACAGGTTGGTGTAGTTGGCCACCGGAGAGTGAAAGAGAGAAACCGGTGTTTGGTGAAGATAGTGGAATTAGGAGTAGGAGGCGTTATCCTAATAAAAAAGCTAAAGATTTCTTTGATGATATATTTGGAGGAGAAGAATCTCAGCCACAGAGTGGAAGTTCAACACCAAAGAAACGTGATGGTGCTGCTTTCAGCCCTGCTCTTCAACCACTTGCATCTTCTCTTCCTACATCATCATTCTTCAGCCTTCCAGCCATAATGGCAAAAGGGTCGGACCTTCAAACATTTGGTTCCCCTCCTAGGAATCCACTCGAAATCGGTATTGCTGCTTCAAATGGATTAGCCTTCTCAGATTCTCATCTATCTAGATTTTCAGCCCAACATAAGGAGTTGCAAACGGATTTAAAACCATCTTCCCGACAAAGTCTCTTATCGAAGGAGTTCTCAAACTCGAGTCTATATGATGAAGTAGACAAAGGAAACAATATGAAACAAGACGCATCTATCACTGAAGTTTCTCCTAATAATACCAGTAATGATAAGTTCCATTTCTCAATATACAAATGGGCAAGTAAAGGCGTGCCTTGGTCAATGCCTCTTAGGACAGAGAGAACCTCGAGGACAAAAGATAAGTTTAAACTTGAAAAAAGCTCGAGCGTTAAGGAATGGATCGTCACTGAGATAACCGCACAAAATGATAGTCTTGAGGAATCTATGGTCAGTGAGATTACCATTGCAAATGATAGTCCTATAATATACAACGGTTCTTCTTCGATGAGAAATAAAAAACAAGATGTGTTAACTGCTTCGACAACTACTCAAAACAAGATTGATTCACATCAGACTATAGACCATATAGTTTCTGCCAAACCTCGATCAGATTCGTTGAGTAGCCGTCAAACTCTTATTAAGGATGTTCTTGATAGTCCTATCTCATCTGGCGCTAAAACAGAATCGAGTACTCATTCTACAAGTGAGTCGGTCTTCTACGAAAAAAATGAAGTTGCTAGTGAAACTCAGAAAAATGAGATCAAATCATTACATTCTCTATTTAGTAAAAGTAATGTAAAACAAGTTAATGATGAGATTACTCGAAAGGGGAGAGAAGAAAACGTGGCGAAAAGCTCAAAGGTATCTTCAAATTTTGATATTCCTATTAATCCAAAGAAGCAAGATGAAAAGCGAAAGACAGTTTCCACGAAAGGTGTAGAGTATAGCAAAGCTACTTCCCGAGGTTCATTAAGCCCAGGCAGAAGTATGGGAAAAGGCCGAGTTAAAGGGAAGGTCAAAGACTTTGTTCAAATATTCAACCAAGAAACTGTAACGAAACCTAAAGATGACTCCAAATCTCGACCTCAGAGTTATACATACAAGCAGAAAGGAGCTGCAAAGGCAAATAATGATGTGGATGGAGATCCTGAAAAGTCGAAGAAGATCTATACCGTAGAGACACTTGATATGCCTGCCAATAATTTGCCACAGAAGGATGATATCTCAGCATCAGCAGAAATTCCTGACACTTCATTTGCTGATATTGGAGATCAAGACGAGTCCTTCCATGAGAATTTCACGATTGAAGTATTATCCCAAGATGAAGATGACGTCTCACAAAACCAAGACATTCAAGAAATCCAAGTCATTGATAAAAAGATACAACAATGGTCTAAAGGGAAGGAAGGAAACATACGCTCGCTGCTGTCAACATTACAATACGTACTTTGGCCAAACTGTGGCTGGAAGCCTGTGCCTCTTGTCGATATAATTGAAGGGAATGCGGTGAAAAGATCTTATCAAAGAGCTTTACTCAGTCTACATCCAGATAAGTTGCAGCAAAAGGGTGCTACTTCAGAACAAAAGTACATTGCAGAAAAAGTTTTTGATATTTTACAGGAGGCATGGACTCAATTCAATATGGTCGGTGCACTCTAA 2100 0.401 MERIYSYPEQRESILLGYDDDPSTSERKSDVDFNDVFGGPPRRRSSVNESVSGEESETGWCSWPPESEREKPVFGEDSGIRSRRRYPNKKAKDFFDDIFGGEESQPQSGSSTPKKRDGAAFSPALQPLASSLPTSSFFSLPAIMAKGSDLQTFGSPPRNPLEIGIAASNGLAFSDSHLSRFSAQHKELQTDLKPSSRQSLLSKEFSNSSLYDEVDKGNNMKQDASITEVSPNNTSNDKFHFSIYKWASKGVPWSMPLRTERTSRTKDKFKLEKSSSVKEWIVTEITAQNDSLEESMVSEITIANDSPIIYNGSSSMRNKKQDVLTASTTTQNKIDSHQTIDHIVSAKPRSDSLSSRQTLIKDVLDSPISSGAKTESSTHSTSESVFYEKNEVASETQKNEIKSLHSLFSKSNVKQVNDEITRKGREENVAKSSKVSSNFDIPINPKKQDEKRKTVSTKGVEYSKATSRGSLSPGRSMGKGRVKGKVKDFVQIFNQETVTKPKDDSKSRPQSYTYKQKGAAKANNDVDGDPEKSKKIYTVETLDMPANNLPQKDDISASAEIPDTSFADIGDQDESFHENFTIEVLSQDEDDVSQNQDIQEIQVIDKKIQQWSKGKEGNIRSLLSTLQYVLWPNCGWKPVPLVDIIEGNAVKRSYQRALLSLHPDKLQQKGATSEQKYIAEKVFDILQEAWTQFNMVGAL 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05567 699 MobiDBLite consensus disorder prediction 421 483 - -
Trre5g05567 699 MobiDBLite consensus disorder prediction 497 531 - -
Trre5g05567 699 MobiDBLite consensus disorder prediction 459 473 - -
Trre5g05567 699 SUPERFAMILY Chaperone J-domain 592 693 IPR036869 -
Trre5g05567 699 MobiDBLite consensus disorder prediction 69 99 - -
Trre5g05567 699 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 600 694 - -
Trre5g05567 699 Gene3D DnaJ domain 595 698 IPR036869 -
Trre5g05567 699 MobiDBLite consensus disorder prediction 1 126 - -
Trre5g05567 699 MobiDBLite consensus disorder prediction 444 458 - -
Trre5g05567 699 FunFam J-domain protein required for chloroplast accumulation response 1 595 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05567 Trre-Chr5 56046487 56049610 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05567 5 56046487 56049610 Trre5g05567 5 56046487 56049610 ECH
Trre1g00172 1 1292966 1298745 Trre5g05567 5 56046487 56049610 PCT