Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g05560 ATGGAGCTAGTAATTCGGAGAACTTCGTTTTTGAATTGCAAGCTTCGATTCGTCGTTGTTGTTTTCGAGATCATATTGATATTGGCATTGGTGGAAGCCCACACTGCAAAGCCCCATGAACACCAACTTCAACGGGGAGGTTTGGATAGGAATACAGATAACATTGCCTCACACTCTTGCATACATGACCAGATTCTTGAACAGAGGAAGCGACCTGGTCGCAAGGTTTATTCAGTTACCCCACAGGTTTATGAGCCTAGTCTCTTGAAGCCCCTTCAGCATAAAGGCAGGACAATACTTGAAGTGTCGACATCATCAGGGACTCAAAAGGATGTGAAGGAACCTATTAGGATATATCTAAATTATGATGCTGTTGGCCATTCCCCCGACAGAGATTGTAGAAAAGTTGGTGCTGTTGTCAAACTTGGAGAGCCTTCTGCAACTTCTCTTCCTGGTTCCCCTTCTTGCAATCCTCACAGTAACCCTCCAATCGTTGGTGATTGTTGGTATAACTGTACTTCTGAAGATATCTCAGGAGATGACAAAAAGCACCGCCTTCGTAAGGCATTAGGTCAGACAGCTGACTGGTTTAGGAGAGCATTGGCTGTTGAGCCTGTCAAGGGGAACTTACGGTTAAGTGGATATTCTGCATGTGGACAAGATGGAGGCGTGCAGCTTCCTCGTGGATATATCGAGGAAGGTGTCCCTGATGCCGACTTAGTTCTTTTGGTAACTACAAGACCTACGACTGGAAATACACTTGCTTGGGCAGTGGCATGTGAACGAGATCAATGGGGCCGTGCTATAGCTGGACATGTGAATGTTGCTCCTCGCCATTTGACTGCTGAGGCAGAGACTTTGCTTTCAGCTACTCTAATACATGAGGTTATGCATGTTCTTGGTTTTGACCCACATGCCTTTGCTCATTTTAGAGATGAAAGAAAAAGACGGCGTGATCAGGTTACAGAACAAGTAATGGATGAAAAGCTTGGGCGGATGGTCAATCGAGTGGTGCTTCCTCGTGTTGTCATGCATTCACGATATCATTATGCGGCATACTCTGGAAATTTTACTGGTTTAGAACTGGAAGATGGGGGAGGACGCGGCACATCAGGATCTCACTGGGAGAAAAGGCTTCTGATGAATGAGATTATGACCGGTTCTGTGGATACAAGATCTGTAGTTTCAAAAATGACTTTAGCTCTCTTAGAAGATAGTGGATGGTACAAAGCCAATTATAGCATGGCAGACCGTCTTGATTGGGGCCGCAACCAAGGTACTGAGTTTGTTACCTCTCCTTGCAATCTCTGGAAGGGAGCTTATCATTGCAACACAACACAATATTCTGGCTGTACATATAACAGAGAGGCAGAGGGATACTGCCCAATTCTAACATATAGTGGAGACCTCCCTCAGTGGGCGCAATATTTTCCACAAGCTAATAAAGGTGGACAATCCTCATTGGCTGATTATTGCACCTATTTTGTTGCGTACTCTGATGGGTCATGTACAGACACAAATAGTGCACGAGCACCAGATAGAATGCTCGGTGAAGTCAGAGGAAGTAACTCTAGGTGTATGGCCTCATCGTTAGTGCGCACAGGATTTGTACGAGGTTCTATGACCCAGGGAAATGGTTGTTATCAGCACAGATGTATAAACAGTTCTTTAGAGGTTGCTGTGGATGGTATATGGAAAGTGTGTCCTCGTGCTGGTGGACCCATTCTGTTCCCTGGATTTAATGGTGAATTAATCTGCCCTGCATATTCAGAACTCTGTAACTCTGATCCAGTATCTGTGTCTGGTCAATGTCCCAATTCATGTAATTTCAATGGAGATTGTGTTGACGGAAGATGCCACTGCTTTCTTGGATTTCATGGGCATGATTGCAGTAAACGTTCCTGCCCCAGCAATTGCAATGGCAATGGCATGTGCCTTTCCAATGGGATTTGTGAATGCAAAACTGGCTACACCGGCATCGACTGTTCCACTGCTGTGTGTGATGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAATTCCGTTGTTCTGACTATGCCGGATACACATGCCAGAATAGCTCTATGCTCCTCTCCAGTCTATCAGTTTGCAAAAATGTACTGGTAAATGATGTATCTGGTCAGCATTGTGCACCCAGCGAGCCTAGCATACTACAGCAGTTGGAAGAAGTGGTTGTTATGCCGAACTACCACCGGTTATTCCCCGGGGGTGCTAGGAAATTATTTAATATATTTGGCAGCTCCTACTGTGATGAGGCTGCTAAACGGCTTGCCTGCTGGATCTCAATCCAGAAGTGTGACAAGGATGGAGACAACAGGCTTCGGGTATGTCATTCAGCATGCCAATCTTATAATATAGCATGTGGAGCTTCACTTGACTGCTCTGACCAAACCCTCTTCAGCAGTGAGGGTGAAGGGGAGGGTCAGTGCACCGGGTTTGGGGAGAGGAAATTGTCGTGGTTTAATCGCCTGCGAAGTGGTTTTTCTTTGAGAAATAGTTCCTTGAAAGGAATGTCTGTAAGATATAGGAAGCTTTAA 2571 0.4543 MELVIRRTSFLNCKLRFVVVVFEIILILALVEAHTAKPHEHQLQRGGLDRNTDNIASHSCIHDQILEQRKRPGRKVYSVTPQVYEPSLLKPLQHKGRTILEVSTSSGTQKDVKEPIRIYLNYDAVGHSPDRDCRKVGAVVKLGEPSATSLPGSPSCNPHSNPPIVGDCWYNCTSEDISGDDKKHRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYIEEGVPDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRDQVTEQVMDEKLGRMVNRVVLPRVVMHSRYHYAAYSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFVTSPCNLWKGAYHCNTTQYSGCTYNREAEGYCPILTYSGDLPQWAQYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINSSLEVAVDGIWKVCPRAGGPILFPGFNGELICPAYSELCNSDPVSVSGQCPNSCNFNGDCVDGRCHCFLGFHGHDCSKRSCPSNCNGNGMCLSNGICECKTGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLVNDVSGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDEAAKRLACWISIQKCDKDGDNRLRVCHSACQSYNIACGASLDCSDQTLFSSEGEGEGQCTGFGERKLSWFNRLRSGFSLRNSSLKGMSVRYRKL 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g05560 856 ProSitePatterns EGF-like domain signature 2. 651 662 IPR000742 -
Trre5g05560 856 ProSitePatterns EGF-like domain signature 1. 651 662 IPR000742 -
Trre5g05560 856 Gene3D Leishmanolysin , domain 2 309 434 - -
Trre5g05560 856 Pfam EGF-like domain 635 662 IPR013111 -
Trre5g05560 856 Gene3D - 109 299 - -
Trre5g05560 856 FunFam leishmanolysin-like peptidase isoform X2 437 496 - -
Trre5g05560 856 Gene3D Leishmanolysin domain 3 438 496 - -
Trre5g05560 856 FunFam SD03917p 592 634 - -
Trre5g05560 856 ProSiteProfiles EGF-like domain profile. 631 663 IPR000742 -
Trre5g05560 856 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 54 815 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Trre5g05560 856 Gene3D Laminin 634 665 - -
Trre5g05560 856 Gene3D Laminin 603 632 - -
Trre5g05560 856 Gene3D Leishmanolysin domain 4 498 593 - -
Trre5g05560 856 FunFam leishmanolysin-like isoform X2 498 593 - -
Trre5g05560 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 397 426 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Trre5g05560 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 244 273 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Trre5g05560 856 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 113 599 - -
Trre5g05560 856 FunFam Peptidase M8, leishmanolysin 109 299 - -
Trre5g05560 856 Pfam Leishmanolysin 170 595 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Trre5g05560 856 FunFam Teneurin transmembrane protein 2 603 633 - -
Trre5g05560 856 FunFam leishmanolysin-like peptidase isoform X2 310 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g05560 Trre-Chr5 56001420 56008573 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g05560 5 56001420 56008573 Trre5g05560 5 56001420 56008573 ECH
Trre1g00230 1 1678303 1685459 Trre5g05560 5 56001420 56008573 PCT