Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04913 ATGGCGTCGAGTTTTGATCGATGGGAAAAAGATCCTTTCTTTAATGCTGCCGAAGAAGTTCAGGAATCTGCAGATAGGGTAGAATCTCTATATAGGACATGGATTCATGCAATGAAAGATGCCTCTAGCCCTTGGAACTCCGATGAACTTCGCCGAGATCTTCGTACTGCTCTTGACACTGCTAAATGGCAGTTAGAGGAATTTCAACAAGCAGTCAAGTCAAGTTATAGTAAAAGGTCGAGCGATGATGCTAGAAACAGACACCAAGATTTCGTTGTTGCTATTGATGGCAAGATTTCAAAAGTGGAACATTTGTTACAACTGCAAGAATCTGTTCCTTTGGGTAGCAAGGCGTCCATGTCCATGCCTTGGGTGTCATTGGATGAAGGAGAGCGAAATGAGCTTGCATCGTTTCTTTCAGGGATGCCGTTGCCTCCGGATGGTGGCAAACCCCCCCTTAAATGTACCGTTAAAGGTAGTGAAAATCAACAATTAAGTGATATAGATTCGTTTAGAGAAGCAGTGGATGAGAAACCACAAGGACATCGTAGGGTAGCTAGTGCTAATGTTGATATTAGTTCTTGGAAAATTGCTGTTTCGGATAACGTGCAACAATCAACTTCCTCTAATGATTCTTCTGGTCCTATGCATAAGGGTCCTATGCATAAAGTAGCTAGCCTCTCTGGGTTTTTTAGTTCTGTGGAATCCATCTCGAAGTTTAAGTGGCCTAAGAATGGTTATAAGAAGCTTAAAGCAATGAATCATCATCAAGAAACTGATAATCCACTACTACCGTCAACTGACTTCAACAGGGCCATCAATGCTTGCAATGATGAATGCTATGATAAGCCACTCCAAGGGTGGTATGGGGATTTCCAAAGAAAAATTCAAAGATCTCAATACAAAATGCAATATAACCGGCCCGTTCAAGTAACAGTATGGATTGTTATTATTCTTTGCTTCATTGTTTTGATTGCATTTTGCACAATGTAG 993 0.4109 MASSFDRWEKDPFFNAAEEVQESADRVESLYRTWIHAMKDASSPWNSDELRRDLRTALDTAKWQLEEFQQAVKSSYSKRSSDDARNRHQDFVVAIDGKISKVEHLLQLQESVPLGSKASMSMPWVSLDEGERNELASFLSGMPLPPDGGKPPLKCTVKGSENQQLSDIDSFREAVDEKPQGHRRVASANVDISSWKIAVSDNVQQSTSSNDSSGPMHKGPMHKVASLSGFFSSVESISKFKWPKNGYKKLKAMNHHQETDNPLLPSTDFNRAINACNDECYDKPLQGWYGDFQRKIQRSQYKMQYNRPVQVTVWIVIILCFIVLIAFCTM 330
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04913 330 CDD SNARE_NTD_STX6-like 11 103 - -
Trre5g04913 330 SUPERFAMILY t-snare proteins 10 105 IPR010989 GO:0016020|GO:0016192
Trre5g04913 330 FunFam Syntaxin 10 8 109 - -
Trre5g04913 330 Coils Coil 51 71 - -
Trre5g04913 330 Gene3D - 9 109 - -
Trre5g04913 330 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Trre5g04913 330 PANTHER OS05G0443700 PROTEIN 1 321 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre5g04913 Trre-Chr5 50862516 50864635 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04913 5 50862516 50864635 Trre5g04913 5 50862516 50864635 ECH
Trre1g00387 1 2764169 2765630 Trre5g04913 5 50862516 50864635 PCT