Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04892 ATGTCCGATTCAGAAATCACAACCGTAACCACTTCCGACCAAGACTCAAGCTCCGCTCCACCGCCGCAACAAAACGGTGACCAAACCAAGCTCAATTCCTCCGGATTCAGCATATGGCCACCAACTCAACGCACCCGCGACGCTGTCATCACTCGTTTAATCGAAACCCTAACCACTCCCTCCGTCCTTTCCAAACGATACGGTACATTGCTCCATGACGAAGCCGCAACCGCCGCTCGTCAGATCGAGGATGAGGCTTACTCTATCGCCGGTGGTTCCGCCGCTCCTGACGGCGGCGACGGTATTGATATTCTCCAGGTTTACTCCAAGGAAATCAGTAAACGGATGCTTGAAACCGTTAAGGCTAGACCTAACATTGCTTCTAATGCTGTTGATAATGATGCTGCTGAGGCTCCTCCTGCTGATGATCCTCCTTCTTCTTCCCCAACCGGAGATGATGCTTCTGATACTGGCAAGATCGAAACCGATGCATGA 495 0.5172 MSDSEITTVTTSDQDSSSAPPPQQNGDQTKLNSSGFSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLLHDEAATAARQIEDEAYSIAGGSAAPDGGDGIDILQVYSKEISKRMLETVKARPNIASNAVDNDAAEAPPADDPPSSSPTGDDASDTGKIETDA 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04892 164 MobiDBLite consensus disorder prediction 1 42 - -
Trre5g04892 164 Gene3D WPP domain 35 132 IPR038214 -
Trre5g04892 164 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 1 150 IPR044692 GO:0000278|GO:0048527
Trre5g04892 164 MobiDBLite consensus disorder prediction 123 164 - -
Trre5g04892 164 MobiDBLite consensus disorder prediction 1 41 - -
Trre5g04892 164 Pfam WPP domain 36 128 IPR025265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04892 Trre-Chr5 50728848 50729342 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04892 5 50728848 50729342 Trre5g04892 5 50728848 50729342 ECH
Trre1g00378 1 2700604 2701192 Trre5g04892 5 50728848 50729342 PCT