Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04867 ATGTCTTCATTTTTCTTGTTAATTTTTCTGATTATTCAACCATGGTCAATGAAGCATATACAAGCTCAAAAAAACATATTCATATTAGCTGGACAAAGCAACATGGCTGGAAGAGGAGGAGTAACAAACGACACAACAACCGGCGTAACAACCTGGGACGGCGTCATTCCACCAGAATGCAATCCAAGTTCATCGATTATAAAACTCAATGCACATCTTAAGTGGGTGGAAGGACATGAACCACTTCATGAAGACATAGATACACTAAAGACAAATGGGGTTGGACCAGGAATGGTGTTTGCAAATTCTGTGTTGGAAAAAATCTCAGAAATTGGTTTGGTGGGGTTGGTGCCATGTGCAATTGGTGGTACCAATATAAGTGAATGGGAAAAAGGAAAAGTGCTTTATAATCATATGATGAAGAGGGTTAAGGTATCTTTGAATGATGGTGGTAGTGTTCGAGCACTTCTTTGGTTTCAAGGGGAATCTGATACTGTAAGTTTAAGGGATGCTCAATCTTATCAAACAAGAGTTCATAAATTTTTCTTAGATGTCAGAAATGATTTGCAATCTCCATTGCTTCCCATAATTCAGGTGGCTTTGGCATCAGGATCAGGCCCATACATAGAGATAGTGAGACAAGCCCAGATGGGTATTGACCTCTTGAACTTGAAAACTGTGGATGCTAAGGGCTTACCTCTTCAGCCTGATGGGCTTCACCTTTCAACCCCGGCCCAGGTTGATCTTGGAAAAATGATGGCTGATGCATTCCTTAAATTTGTACCCTCTTCAAGTCATATATATCACAATGTTAGTCCAATACATAATGAGGCCTCAAGTTCTATTGGGATTTCTAGTTTTGTTTCTCATATTCATATTCTTCCTTTGTTCATAACTTTTCTCACAATGATGTCCCTAACTTTCTTGTAG 930 0.3925 MSSFFLLIFLIIQPWSMKHIQAQKNIFILAGQSNMAGRGGVTNDTTTGVTTWDGVIPPECNPSSSIIKLNAHLKWVEGHEPLHEDIDTLKTNGVGPGMVFANSVLEKISEIGLVGLVPCAIGGTNISEWEKGKVLYNHMMKRVKVSLNDGGSVRALLWFQGESDTVSLRDAQSYQTRVHKFFLDVRNDLQSPLLPIIQVALASGSGPYIEIVRQAQMGIDLLNLKTVDAKGLPLQPDGLHLSTPAQVDLGKMMADAFLKFVPSSSHIYHNVSPIHNEASSSIGISSFVSHIHILPLFITFLTMMSLTFL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04867 309 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 14 265 - -
Trre5g04867 309 SUPERFAMILY SGNH hydrolase 25 270 - -
Trre5g04867 309 Gene3D SGNH hydrolase 23 261 IPR036514 -
Trre5g04867 309 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 24 259 IPR005181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04867 Trre-Chr5 50533487 50535658 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04867 5 50533487 50535658 Trre5g04867 5 50533487 50535658 ECH
Trre1g00377 1 2688816 2690787 Trre5g04867 5 50533487 50535658 PCT