Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04852 ATGCCAAGTGTTCATCATCAATTGGATCAAGGTAATAACAAGAACAACAAAGGTAATCATAATAATAATAATAATTATTATTCTCTGTTTCGCAATGGTGTTTCTGGAAAAAGAACACCAACTTTATTCAGTTGGATTGATAATCCATCTATGGCTACTGATGCTGTTGAAAATGGATGGTCAAGATTTGCTTTCACTAGTTATAAAAGTTACATGCCATCTCCATCAATGAGGGCTACACTGTTAGGATCATGTGCTGCACCTGTAGGTGATTATAACGGAAGAGAATCATCAGAAGCTGAAATTAGTTGGGAAGTTTCACGTGGATCAGATGAATTTATGCAGAAAGTTAGATTAAATCCTGGATTAAAAAAATCTAATCAAATTATTCAAACTAATTCTATGGTTAATTCTGTAATTAGAACTGCTTTACCGTTACCTGGTCCTGTGTTAGGAAATTGTGTTTTCCCACAGGAATCATATTTTGAGATTACGATTTTGTATTCGTCTCGCGGTGATGAGTTTGATTCGGTTCGAAAGAGTGTAGATGGTAGTGACAAAACCAAGCTTATTGCGAAAGGGAATTCGGAGGCGCTTGTTCATGTTACGAGCGGTAATAGTCATAAGAAAATTAATAGTGTTGAAGAAATGAAGGTTGATGGTAGAGAGAATGGGAAGAAGAATGAATCTGTTATGTTTTCGATGGGATTAACGATTGGTGGTCCTGTTCTTTTGAAAGTTCCTGGTAGTTATCCTGGTAGCATTGGTTTCAACTCAAATGGTTCTGTTTATCTTGATGGAATGAAACTTGTATTTGAATCTGAGAAGGCAGAATGGATAGGAACAGATAAGGTGATAGGGTGTGGATTTGATCCAAGGCAGAAGAAAGTTTTCTTCACATTAGACTCAGAGTTGATGCATGTAATCCATGGCCAAACAGAAGAATTTAGCACTCCATTATATCCAACCTTAGCTGCAAATATAGACATTATGGTATTAGTTAATTTTGGACAAAATGCATTTAAATATGCACCAGCAAATGCTCAAAGAACACCAAATCCATGTTTTGTATCACCACTTGTAAATTCTCCTACAATAGGCTATGATGATAGCAAGGAACTATTCTCCATGGGTAGGATTGATTCTCAGTGGCATAATAGGACTACAACTCAAGGAAGTCACAACAATGGTAATAATTCAACCATGGATTTTGATGAAGAGTCTGACGCCGATTTGTTTGAAATTGTCATAGACGGTTCTCGAAAATCTTCAAATACAACATCATAG 1287 0.3613 MPSVHHQLDQGNNKNNKGNHNNNNNYYSLFRNGVSGKRTPTLFSWIDNPSMATDAVENGWSRFAFTSYKSYMPSPSMRATLLGSCAAPVGDYNGRESSEAEISWEVSRGSDEFMQKVRLNPGLKKSNQIIQTNSMVNSVIRTALPLPGPVLGNCVFPQESYFEITILYSSRGDEFDSVRKSVDGSDKTKLIAKGNSEALVHVTSGNSHKKINSVEEMKVDGRENGKKNESVMFSMGLTIGGPVLLKVPGSYPGSIGFNSNGSVYLDGMKLVFESEKAEWIGTDKVIGCGFDPRQKKVFFTLDSELMHVIHGQTEEFSTPLYPTLAANIDIMVLVNFGQNAFKYAPANAQRTPNPCFVSPLVNSPTIGYDDSKELFSMGRIDSQWHNRTTTQGSHNNGNNSTMDFDEESDADLFEIVIDGSRKSSNTTS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04852 428 SUPERFAMILY Concanavalin A-like lectins/glucanases 246 343 IPR013320 -
Trre5g04852 428 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 39 416 IPR043364 GO:0098609
Trre5g04852 428 MobiDBLite consensus disorder prediction 1 28 - -
Trre5g04852 428 Gene3D - 120 351 IPR043136 -
Trre5g04852 428 Pfam SPRY domain 244 338 IPR003877 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04852 Trre-Chr5 50382147 50384418 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04852 5 50382147 50384418 Trre5g04852 5 50382147 50384418 ECH
Trre1g00362 1 2545792 2547676 Trre5g04852 5 50382147 50384418 PCT