Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04828 ATGGAGGATGTTGAAGACAAGTTGCCCTCTGAGTCCTCTACAAAAATTGCTGAAGAGACACCAGCAGCAGAACACATTGAAGACATGTTCCCCTCTGAATCCTCTTCAAAACTTACCAAAGAGACACATATAGAAGAACATGTTGAAGACAAATTTCCCTCGGACTCCTCTACACAAATTACTGAAGAGACACCACCGGCAGAACACGTTGAAGACATGTTTCCCTCTGAATCCTCTTCAAAACTTACCGAAGAAACACATATGGCAGAACATGCTGAAGACAATTTGCCCTCTGACTCCTCTACAAAAATTGCAGAAGTGACACCAGCGGCAGAACACGTTGAAGACATGTTCCCCTCTGAATCCTCTTCAAAACTTACCGAAGAGACACATGTAGAAGAACATGTTGAAGACAAGCTACCCTCTGAATCCTCTCCAAAAATTTCTGAAGAGACACCACCAGCAGAACACGTTGAAGACAATCTACTCCCTGAGTGCTCTACCAAAATTACTGAGACACAACTGACGGAACCCTCTGAAGAAAATACTGATGTGATAAACCCACCATATAATCAAACTTCCACAGAATTTCCAATTCCAATTAGTAATGGAAAAGTAGAGTCTGACTCTCACTTGACAGTGAATGAGCTCCCTGAATTATCAGTGTTGCCAAATGTTTCTGATGGTCACACTATAATACAAGATGAGGATGTTTCTGTAGATAATTCAGCTTCATTTCCAAATGATACAGTGGGTGTAACAGGAGCAAGCGACCAGCTAAAATTTGTTGAAGATTCTGAACCACGTGCTACAGAAGATATCTCTGACAGGCATGAATTGCGTGTTGATGTTACTAATGTTGCTGCAGATAATGAGATTAGACTTTCAGCTTCCTCTTCTGAAACAAAAGATTTGCAAAATGATCTTAATGAAATAAAGACGGCTGTTGGAGCAGTTGATTCACCGACTCAAACCAAGCAGGTTGATGTCAAACGAGGCCTTATTGATACCACACCCCCATTTGAATCTGTCAAGGAAGCTGTATCTAAATTTGGAGGAATTGTGGATTGGAAGGCTCATAGAATCCAGACTGTGGAGAGGCGCAATCTAGTAGAACAAGAACTTGATAAAGCAAATGTGGAGATCCCAGAATACAGAAAACAAGCAGAGGTGGCTGAACAGACAAAAGTACAAGTGCTAAAGGAGCTTGACAGCACGAAGAGACTTATAGAAGAGTTAAAGCTTAACCTAGAGAGGGCACAAACTGAAGAGCATCAGGCAAGACAGGACTCGGAACTTGCAAAGCTCAGAGTGGAAGAGATGGAGCAAGGTATTGCAGACGAATCTAGTGTTGCAGCAAAGGCACAACTGGAGGTTGCGAAAGCTAGGTATTCAGCAGCTGTTACAGATTTAGCAGCTGTGAAAGAGGAGCTGGAAGCATTGCGTAAGGAGTATGCTTCCTTAGTGACTGATAGAGATGAAGCTATTAAGAAAGCTGAGGAGGCAGTTACAGCATCCAAGGAAGTAGAGAAGTCGGTGGAAGATTTAACTATTGAACTAATCGCCACAAAAGAGTTATTGGAGACTGCTCATGCCGCACACTTGGAAGCAGAGGAACACAGAATAGGAACAGTGATGGCGAGAGATCAAGATTCACTCAACTGGGAGAAGGAACTTAAACAGGCAGAAGAAGAGCTCCAGAGAATCAACGAGCAAATGTTGTCCGCAAAGGACCTCAAATCTAAACTGGAAACAGCCTCTGGTTTGCTGCTTGATTTGAAAGCTAAATTAACTGTTTATATGGAATCAAAGCTAAAGCAGGAAAGTGATGAAGAACTCTCACAAGGAGGCCTAGAAGAACCAAAAAAGAAGACACACGCTGAAATACAAGCAGCCGTGGAATCGGCCAAAATGGAACTTGAGGAAGTAAAACTTAACATAGAGAAAGCAAATGCTGAGGTTAGTTGCTTGAAGCTAGCTGCCACATCTTTAAAATCAGAATTGGAACAAGAAAAGTCAACTCTTGCCTCCATCAGGCAAAGAGAAGGAATGGCCTCCATTGCAGTTGCATCTCTAGAAGCTGAGTTGGACAAGACTAGATCAGAAATAGCTTTGGTTCAGATGAAGGAGAAAGAAGCAAAAGAGCAGATGACTGAACTTCCAAAGAAGCTACAACTAACAGCTGAAGAGGCTAATCAGGCCAACTTGCTTGCCCAAGCATCTCGTGAAGAGCTACAGAAAGTAAAGGCAGAAACAGAGCAAGCCAAGGCTGGAGTAAGTACCTTGGAAAGCAGGTTACTCGCAGCTCAAAAGGAGATAGAGGCTGCAAAGGCTTCGGAAAAGCTGGCAATAGCAGCAATTAAAGCATTGCAAGAGAGTGAATCAAATAGAAGCAAAAATGAAGTGGACCCTTCCAGTGGGGTAACACTTTCTTTGGATGAGTACTATGAGCTTAGCAAACGAGCTCACGAGGCAGAAGAGCGAGCCAATATGAGGGTTGCATCTGCTAATTCTGAAGTTGAGATAGCTAAGGAGTCTGAATTGAAATCCTTTGAAAAGTTGGATGAAGTGAATAGAGAAATAGCTGCTAGAAGGGAATCCCTGAAGATGGCAATGGAAAAAGCTGAGAAGGCAAAGGAAGGTAAATTAGGTGTAGAACAAGAACTTCGAAGGTGGAGAGCTGAAAATGAGCAACGGAGAAAGGCTGGTGAATCTGGCCAAGGAGTGGTTAACCAGAATAGAAGTCCTAGGGGTAGTTTTGAGGGGAGTAAAGAAGCAAATAATTTTGACCGGTCCCATTATGCAGATAATCCTGCACAAAATTTGACAAGCCCTAAGAATACACATGCAGAAAATGATGAAGGTGGATCATCACCAGAATCAAAACATGCAAAAAAGAAGAAGAAATCATTGTTCCCACGGGTTTTGATGTTCTTTGCTAGAAAAAAATCTCATCCAAAAGGGTAA 2967 0.424 MEDVEDKLPSESSTKIAEETPAAEHIEDMFPSESSSKLTKETHIEEHVEDKFPSDSSTQITEETPPAEHVEDMFPSESSSKLTEETHMAEHAEDNLPSDSSTKIAEVTPAAEHVEDMFPSESSSKLTEETHVEEHVEDKLPSESSPKISEETPPAEHVEDNLLPECSTKITETQLTEPSEENTDVINPPYNQTSTEFPIPISNGKVESDSHLTVNELPELSVLPNVSDGHTIIQDEDVSVDNSASFPNDTVGVTGASDQLKFVEDSEPRATEDISDRHELRVDVTNVAADNEIRLSASSSETKDLQNDLNEIKTAVGAVDSPTQTKQVDVKRGLIDTTPPFESVKEAVSKFGGIVDWKAHRIQTVERRNLVEQELDKANVEIPEYRKQAEVAEQTKVQVLKELDSTKRLIEELKLNLERAQTEEHQARQDSELAKLRVEEMEQGIADESSVAAKAQLEVAKARYSAAVTDLAAVKEELEALRKEYASLVTDRDEAIKKAEEAVTASKEVEKSVEDLTIELIATKELLETAHAAHLEAEEHRIGTVMARDQDSLNWEKELKQAEEELQRINEQMLSAKDLKSKLETASGLLLDLKAKLTVYMESKLKQESDEELSQGGLEEPKKKTHAEIQAAVESAKMELEEVKLNIEKANAEVSCLKLAATSLKSELEQEKSTLASIRQREGMASIAVASLEAELDKTRSEIALVQMKEKEAKEQMTELPKKLQLTAEEANQANLLAQASREELQKVKAETEQAKAGVSTLESRLLAAQKEIEAAKASEKLAIAAIKALQESESNRSKNEVDPSSGVTLSLDEYYELSKRAHEAEERANMRVASANSEVEIAKESELKSFEKLDEVNREIAARRESLKMAMEKAEKAKEGKLGVEQELRRWRAENEQRRKAGESGQGVVNQNRSPRGSFEGSKEANNFDRSHYADNPAQNLTSPKNTHAENDEGGSSPESKHAKKKKKSLFPRVLMFFARKKSHPKG 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04828 988 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 333 981 - -
Trre5g04828 988 Coils Coil 626 681 - -
Trre5g04828 988 MobiDBLite consensus disorder prediction 933 952 - -
Trre5g04828 988 Coils Coil 552 596 - -
Trre5g04828 988 Coils Coil 854 895 - -
Trre5g04828 988 MobiDBLite consensus disorder prediction 905 922 - -
Trre5g04828 988 Coils Coil 464 498 - -
Trre5g04828 988 MobiDBLite consensus disorder prediction 166 196 - -
Trre5g04828 988 MobiDBLite consensus disorder prediction 7 26 - -
Trre5g04828 988 MobiDBLite consensus disorder prediction 894 988 - -
Trre5g04828 988 MobiDBLite consensus disorder prediction 1 196 - -
Trre5g04828 988 MobiDBLite consensus disorder prediction 606 625 - -
Trre5g04828 988 Coils Coil 689 716 - -
Trre5g04828 988 Pfam Weak chloroplast movement under blue light 332 899 IPR008545 -
Trre5g04828 988 MobiDBLite consensus disorder prediction 83 97 - -
Trre5g04828 988 MobiDBLite consensus disorder prediction 126 158 - -
Trre5g04828 988 MobiDBLite consensus disorder prediction 38 53 - -
Trre5g04828 988 Coils Coil 731 779 - -
Trre5g04828 988 Coils Coil 368 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04828 Trre-Chr5 50074332 50078297 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04828 5 50074332 50078297 Trre5g04828 5 50074332 50078297 ECH
Trre1g00330 1 2322933 2326317 Trre5g04828 5 50074332 50078297 PCT