LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre5g04434	ATGCAAGCGGTTGGAAGGTTAGGTAGCTATATCAGTCAAGGCGTATACACTGTTTCCGGTCCTTTTCATCCATTCGGTGGCGCCGTCGATATCGTCGTCGTTCAACAACAAGACGGTTCATTCAAATCATCACCATGGTATGTTCGATTTGGTAAATTCCAAGGTGTTTTAAAATCTAAAGAAAAAATTGTTCAAATCAATGTTAATGGAATTGATGCTGATTTTCAAATGTATCTTGATCATAAGGGAGAAGCATTCTTTTTAAAAGAAATTGATGATGTTGAATCAATTTTAAATATTGATCCATCAGAATCTGGTGATGATGATGCTGATGATCAATCTTTTAGGTCTAAAAATAGTAATTTAGGTTCTGAAGATGGTGGAATTGTAGGGAGAAGTACCTCTCGTCGTTCGCGGATTCTTGGTCTTATGTTTGGGAGAAGATCTTTGAGTGGTGAATTTGAAGATGCTATTGGGAATAAAGAACGCGCCGAGATTGCTGCTAATTTGTTGGATATTAAATGGTCTACAAATGGTGATCATGCTGTGGTTGTGGAGAATGAAGATGGTTCTTTTGGTGTTGTTGCACAACATGAAAAGAAATTGAATGGAGAAGAGGTTTCTGTGGTTCAGGGTGTTGAAGAGAGTTCTAAAGTGAACACGGTTAGTTGTTCGAGTGAACAAACTCATGAGGTTATGAACCTTTCTCATGGAGAGGTCTATGTCCATCATCAAGTCTCGCATTCACTCCCGTCTAAGGGTACGGAAACTGAGAAAGTCACTATGGATGCTGATGTAGTGGAGGTCTTTGAGTTTGATTCTCAGGCTCAGCAAAGGAACTCTTCTGATTCTGAAGCTAGTATGTACGATGTCGATGTGGATATAGGACATTGTTCAAGTGAGAATGTTGGGACCAAAGCTTCCAGTTACTACAGCCAGGATGACCAAGGATCATGTGAGAATAACACGAAGGATAGAGATTTCTCTAGCACGTTATCAACTCCACAATACTCTCTTGGTGATTGTCTACCTAGTGAAACATCAAGGAGACCATCGTCCTCGAGTTCAGATGAAGAAAATTTCCTTTTTAGTGACCTTGATGAAAATGTAATCAATGATCGATCTGAGAGATCATTAACCTCTGAATATATAGATAAAGAAGATAATCTTTCTTATGAGAATGGCACTAAACTCTCAAGAGTGACATCCTGTCCCATAGTTATCCCTAGAAATAAGGATGCTGGGGGGGAAGTTGAGCAGCGCACAGGATCCTTGCCAAATGCTTCTTCTGGTAGTAACAGTATGCGCACACATGTTCGTTATCCTTTAAGTCAATCACTGGACTCTACATTTCCTGTTGGAGATGGCTTGAAATGCTTAAAATTAGATGAGTACAAAGAAAAGCAGCTACCGAATGAGCAGGCAGGTGCCAAAGATTACCAAGATTCTGATGAATTCAAAGATACAGCTCTGAATCTCCCTCCTGGAGGTACTTCAACAACCGGCTCTTCACAAGGTACAAATTGGAGAATCTGGCCTTTTCCCTTGAGCAGATCAGTATCTAGAGAATCTTCGCCACCTATTCCAAATGATGATGCCAAAAATACTGCTAATGGCAATTCTCCAGAGAATAAGATTTCCTCAGATGTGAACAAATATGATACTAAACCCCCTAAACCCAATCGAACAAAAAAGAAGATTAGAGAAACAACTCCAACTTCTGAACAGATAGCATCGTTGAATCTGAAGGAAGGGAGGAACATTGTAACCTTCACTTTTTCTACAGCTATGCTGGGGAATCAGCAGGTTGATGCTCAAATATATCTGTGGAAATGGAACGCTCGCATAGTAATCTCAGATGTGGATGGGACAATTACAAAGTGA	1884	0.4002	MQAVGRLGSYISQGVYTVSGPFHPFGGAVDIVVVQQQDGSFKSSPWYVRFGKFQGVLKSKEKIVQINVNGIDADFQMYLDHKGEAFFLKEIDDVESILNIDPSESGDDDADDQSFRSKNSNLGSEDGGIVGRSTSRRSRILGLMFGRRSLSGEFEDAIGNKERAEIAANLLDIKWSTNGDHAVVVENEDGSFGVVAQHEKKLNGEEVSVVQGVEESSKVNTVSCSSEQTHEVMNLSHGEVYVHHQVSHSLPSKGTETEKVTMDADVVEVFEFDSQAQQRNSSDSEASMYDVDVDIGHCSSENVGTKASSYYSQDDQGSCENNTKDRDFSSTLSTPQYSLGDCLPSETSRRPSSSSSDEENFLFSDLDENVINDRSERSLTSEYIDKEDNLSYENGTKLSRVTSCPIVIPRNKDAGGEVEQRTGSLPNASSGSNSMRTHVRYPLSQSLDSTFPVGDGLKCLKLDEYKEKQLPNEQAGAKDYQDSDEFKDTALNLPPGGTSTTGSSQGTNWRIWPFPLSRSVSRESSPPIPNDDAKNTANGNSPENKISSDVNKYDTKPPKPNRTKKKIRETTPTSEQIASLNLKEGRNIVTFTFSTAMLGNQQVDAQIYLWKWNARIVISDVDGTITK	627

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre5g04434	627	MobiDBLite	consensus disorder prediction	309	360	-	-
	Trre5g04434	627	MobiDBLite	consensus disorder prediction	470	574	-	-
	Trre5g04434	627	MobiDBLite	consensus disorder prediction	99	131	-	-
	Trre5g04434	627	Pfam	LNS2 (Lipin/Ned1/Smp2)	570	627	IPR013209	-
	Trre5g04434	627	MobiDBLite	consensus disorder prediction	412	436	-	-
	Trre5g04434	627	MobiDBLite	consensus disorder prediction	549	571	-	-
	Trre5g04434	627	MobiDBLite	consensus disorder prediction	309	361	-	-
	Trre5g04434	627	MobiDBLite	consensus disorder prediction	493	548	-	-
	Trre5g04434	627	Pfam	lipin, N-terminal conserved region	1	94	IPR007651	-
	Trre5g04434	627	MobiDBLite	consensus disorder prediction	470	486	-	-
	Trre5g04434	627	MobiDBLite	consensus disorder prediction	422	436	-	-
	Trre5g04434	627	PANTHER	LIPIN	1	627	IPR026058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre5g04434	Trre-Chr5	46445571	46448631	Tandem

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Trre5g04434	5	46445571	46448631	Trre5g04434	5	46445571	46448631	ECH
	Trre1g00313	1	2240273	2244148	Trre5g04434	5	46445571	46448631	PCT