Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03910 ATGGCGTTATCAACTCCACAGATACAAAGATTCCTTTTAACCAAACTCCATAGACGCTACTCCACTTCTTCCAAATCCAACAATTTTAACAGAAACAGAAACATCTTCAACAGTAGAAGAAGAAGTCGTTGTTACTCTGCCATAGCCATTGATGCACCTTCATCATTGACAGATTCTCCTCCTATTAGATGGGGTTCTGTTTCTTTGCAGGGTCCTCGTGAAGAAATGGAAGATGATATTATTCTTAGACCTGATAGTCTTCAAGGTTTCTCTTTTGCTGCTGTTTTTGATGGTCATGGTGGCTTTGCTTCTGTCCAGTTTCTCAGGGAAGAGCTATACAAGGAGTGTCTTGAAGCTCTACAAGATGGATTACTATTGCTCGGGAAAGATTTCAAAGCTGTTGAAGACGCATTAAAACAGGCATTTGCTAAGGCTGACATGAAGCTGTTAAAATGGCTTGAAATGAAAGGGGAGGAGGAGGATGAATCAGGTGCTACCGCCACTGCCATATTCCTTGGAGATAATAAGCTGCTAATTTCCCATATTGGCGACTCATCTGTGGTTTTATGCAGATCTGGAAAACCAGAATTGCTGACTAGTCCTCACCGTCCCTATGGGAGCAACACGGCTTCTCTTCAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGATTGTCAATGGTAGGATTTGTGGAGATATTGCTGTATCTCGTGCATTTGGGGACATTCGATTCAAAACGAAGAAGAATGAGATGCTACGAAAAGGAGTTCAGGAAGGAAGGTGGACAGAAAAATACATTTCTCGTATACAGTTCAAAGATGACCTGGTTGTTGCACGCCCTGATATTTATCAAGTAACTCTCGGCTCAGATGCAGAATTTATAGTGTTAGCATCCGATGGCTTATGGGATTACATGAGCAGCTTAGACGCAGTTACTTTTGTGAGGGATCAACTACGAAAACATGGAAATACACAGCTAGCTTGTGAATCCCTTGCACAAGTCGTTTTGGACCAACGTACACAGGATAATGTCAGCATTATAATTGCCGATCTAGGGAAGACAGACTGGAAGAATCTGCCATTGCAGCAACAAAATGTGATATTTGAGCTAGTCCAAGCCCTTGCCACAGTTGGAATTGTGTCTGTTGGAATCTGGTTTACATCACAGCTTTCTTTATAG 1182 0.4196 MALSTPQIQRFLLTKLHRRYSTSSKSNNFNRNRNIFNSRRRSRCYSAIAIDAPSSLTDSPPIRWGSVSLQGPREEMEDDIILRPDSLQGFSFAAVFDGHGGFASVQFLREELYKECLEALQDGLLLLGKDFKAVEDALKQAFAKADMKLLKWLEMKGEEEDESGATATAIFLGDNKLLISHIGDSSVVLCRSGKPELLTSPHRPYGSNTASLQEIKRIREAGGWIVNGRICGDIAVSRAFGDIRFKTKKNEMLRKGVQEGRWTEKYISRIQFKDDLVVARPDIYQVTLGSDAEFIVLASDGLWDYMSSLDAVTFVRDQLRKHGNTQLACESLAQVVLDQRTQDNVSIIIADLGKTDWKNLPLQQQNVIFELVQALATVGIVSVGIWFTSQLSL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03910 393 ProSiteProfiles PPM-type phosphatase domain profile. 63 352 IPR001932 -
Trre5g03910 393 Pfam Protein phosphatase 2C 65 345 IPR001932 -
Trre5g03910 393 ProSitePatterns PPM-type phosphatase domain signature. 92 100 IPR000222 GO:0043169
Trre5g03910 393 Gene3D - 62 359 IPR036457 -
Trre5g03910 393 CDD PP2Cc 62 352 IPR001932 -
Trre5g03910 393 SMART PP2C_4 53 350 IPR001932 -
Trre5g03910 393 FunFam Protein phosphatase 2C 57 62 359 - -
Trre5g03910 393 SUPERFAMILY PP2C-like 57 353 IPR036457 -
Trre5g03910 393 PANTHER PROTEIN PHOSPHATASE 2C 33 350 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03910 Trre-Chr5 40238591 40242262 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03910 5 40238591 40242262 Trre5g03910 5 40238591 40242262 ECH
Trre5g03910 5 40238591 40242262 Trre1g00262 1 1899083 1900951 PCT