Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03397 ATGGTTGTGATCAGCGACGAAACTGAGCCTTATGGAGACGAAGGAATTGAAGAGGAAACAAGTGTGGACTATGAGGAGCTGAAGAAACGTATGTGGAAGGACAAAATCTTACTACAAAAGATGAAGGAAAAACAAGACAAGAACAATGAACCAGAGGTACAAGCAAAACAAGAAGCATCAAGAAGGAAAAAGATGTCAAGAGCACAAGATTCGGTGCTCAAATACATGGCGAAAATCATGGATGTTTGCAAAGCCAAAGGTTTTGTTTACGGAATTATCCCCGAAAAAGGTAAGCCAGTATCAGGTTCATCCGATAGTTTACGCGAATGGTGGAAAGATCAAATCCGTTTTGATCATAGCGCGCCACTTGCAGTCGCAAAATACTTGCCACTTTTTGAACAAGACGAACAATTTAATACTATGATAGCTGATCCAAATTCTTACATACACCTCCTCCAAGATTTACAAGATTCAACTCTTGGTGAAAGCTCCGGAGGTAGTAGTAGTAGCAGTAGTAGTAGAAACGAGAAAAGGAAGTGTGTATTTGATGTTGGTGGTGATGATGATGAAGATTATCCACAACAAAGTAAGTTACCTATGAGTTTGGCTAATTTTCTTGATTGTGAAGCAAAAATTGAAAATGTTGATGATTGGATGCAAATGGGAGAGGTTGAATATGAAGGTGGTAAATTTGGATGGGATGTAGAACATTGGTTGAATGATGTGGATGATCATGATATGGAAGCTGCACTTGAAATGGTGAAAGGTAATCATAACATAGATTTTATTCCTCAAAATTCAGTGCATTATCTTCAAGATAAAGAGGAAGAAACCTCTATTTGGGACTTTAAATATCAATACCATCCAGAGCAAGACTAA 879 0.38 MVVISDETEPYGDEGIEEETSVDYEELKKRMWKDKILLQKMKEKQDKNNEPEVQAKQEASRRKKMSRAQDSVLKYMAKIMDVCKAKGFVYGIIPEKGKPVSGSSDSLREWWKDQIRFDHSAPLAVAKYLPLFEQDEQFNTMIADPNSYIHLLQDLQDSTLGESSGGSSSSSSSRNEKRKCVFDVGGDDDEDYPQQSKLPMSLANFLDCEAKIENVDDWMQMGEVEYEGGKFGWDVEHWLNDVDDHDMEAALEMVKGNHNIDFIPQNSVHYLQDKEEETSIWDFKYQYHPEQD 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03397 292 Gene3D - 54 131 IPR023278 GO:0003700|GO:0005634
Trre5g03397 292 MobiDBLite consensus disorder prediction 160 195 - -
Trre5g03397 292 MobiDBLite consensus disorder prediction 160 175 - -
Trre5g03397 292 MobiDBLite consensus disorder prediction 40 66 - -
Trre5g03397 292 Pfam Ethylene insensitive 3 25 161 IPR047091 GO:0003700
Trre5g03397 292 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 13 162 IPR006957 GO:0003700|GO:0005634
Trre5g03397 292 MobiDBLite consensus disorder prediction 176 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03397 Trre-Chr5 30524139 30525401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03397 22 161 EIL Transcription Factor Family AT5G65100 53.797 1.66e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trre5g03397 EIN3 1.8e-51 No_clan