Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03396 ATGGTTGTGATCAGCGACGAAACTGAGCCTTATGGAGACGAAGGAATTGAAGAGGAAACAAGTGTGGACTATGAGGAGCTGAAGAAACGTATGTGGAAGGACAAAATCTTACTACAAAAGATGAAGGAAAAACAAGACAAGAACAATGAACCAGAGGTACAAGCAAAACAAGAAGCATCAAGAAGGAAAAAGATGTCAAGAGCACAAGATTCGGTGCTCAAATACATGGCGAAAATCATGGATGTTTGCAAAGCCAAAGGTTTTGTTTACGGAATTATCCCCGAAAAAGGTAAGCCAGTATCAGGTTCATCCGATAGTTTACGCGAATGGTGGAAAGATCAAATCCGTTTTGATCATAGCGCGCCACTTGCAGTCGCAAAATACTTGCCACTTTTTGAACAAGACGAACAATTTAATACTATGATAGCTGATCCAAATTCTTACATACACCTCCTCCAAGATTTACAAGATTCAACTCTTGGTTCGCTTCTTTCTGCTTTAATGCAACACTGTGTGCCACCACAGAGAAGGTTCCCTCTGGAGAGAGGGATTTCTCCTCCGTGGTGGCCCACAGGATCAGAAAATTGGTGGGGCGAACAAGGTTTAACGGCCCAAGAACAAGGTCCACCTCCTTATAAGAAACCACATGACCTTAAAAAGGCTTGGAAAGTTTCGGTATTGGCCAGTGTTATAAAACATATGTCACCTGATTTGGAGAAATTGAGGAGGTTGGTTACTCAGTCGAAAACCTTGCAAGATAAGATGACAGCAAGAGATAGTGCTACTTGGTCTAAAGTTATGAATCAAGAAGAAGCCTTGCTTAGTGTCACTAATAAGTGCTTTAAAATGTCTATTTCGGAACAAGGTGAAAGCTCCGGAGGTAGTAGTAGTAGCAGTAGTAGTAGAAACGAGAAAAGGAAGTGTGTATTTGATGTTGGTGGTGATGATGATGAAGATTATCCACAACAAAGTAAGTTACCTATGAGTTTGGCTAATTTTCTTGATTGTGAAGCAAAAATTGAAAATGTTGATGATTGGATGCAAATGGGAGAGGTTGAATATGAAGGTGGTAAATTTGGATGGGATGTAGAACATTGGTTGAATGATGTGGATGATCATGATATGGAAGCTGCACTTGAAATGGTGAAAGGTAATCATAACATAGATTTTATTCCTCAAAATTCAGTGCATTATCTTCAAGATAAAGAGGAAGAAACCTCTATTTGGGACTTTAAATATCAATACCATCCAGAGCAAGACTAA 1263 0.3959 MVVISDETEPYGDEGIEEETSVDYEELKKRMWKDKILLQKMKEKQDKNNEPEVQAKQEASRRKKMSRAQDSVLKYMAKIMDVCKAKGFVYGIIPEKGKPVSGSSDSLREWWKDQIRFDHSAPLAVAKYLPLFEQDEQFNTMIADPNSYIHLLQDLQDSTLGSLLSALMQHCVPPQRRFPLERGISPPWWPTGSENWWGEQGLTAQEQGPPPYKKPHDLKKAWKVSVLASVIKHMSPDLEKLRRLVTQSKTLQDKMTARDSATWSKVMNQEEALLSVTNKCFKMSISEQGESSGGSSSSSSSRNEKRKCVFDVGGDDDEDYPQQSKLPMSLANFLDCEAKIENVDDWMQMGEVEYEGGKFGWDVEHWLNDVDDHDMEAALEMVKGNHNIDFIPQNSVHYLQDKEEETSIWDFKYQYHPEQD 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03396 420 Gene3D - 54 131 IPR023278 GO:0003700|GO:0005634
Trre5g03396 420 Gene3D - 142 280 IPR023278 GO:0003700|GO:0005634
Trre5g03396 420 MobiDBLite consensus disorder prediction 286 323 - -
Trre5g03396 420 MobiDBLite consensus disorder prediction 304 322 - -
Trre5g03396 420 FunFam Ethylene insensitive 3-like 1 143 280 - -
Trre5g03396 420 MobiDBLite consensus disorder prediction 40 66 - -
Trre5g03396 420 Pfam Ethylene insensitive 3 25 271 IPR047091 GO:0003700
Trre5g03396 420 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 13 314 IPR006957 GO:0003700|GO:0005634
Trre5g03396 420 MobiDBLite consensus disorder prediction 286 303 - -
Trre5g03396 420 SUPERFAMILY DNA-binding domain of EIN3-like 149 274 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03396 Trre-Chr5 30524139 30525401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g03396 22 275 EIL Transcription Factor Family AT5G65100 62.868 1.04e-120 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trre5g03396 EIN3 9.8e-115 No_clan