Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02621 ATGATGATGATGTATGATGAGATGGCTCTATCTGGTGATCTGGATGTGTTTTCGGCTCCCGTAGTTGAGGAGGATATTACCGCCCGGCAAACTGAACCTGAGGCGATTGTCGACGAAGATTTCAGCGACGAAGAAATTGATGTTGAAGAGCTTGAGAGGAGGATGTGGAAAGATAAAATGCGTCTCAAGCGATTAAAGGAGCAAGTCAAGCCCAAAGATGGACTTGATGCCGCCAAGCAGAGGCAATCCCAAGAACAGGCAAGGAGGAAAAAGATGTCGAGGGCTCAAGACGGAATCTTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAAGCTCAAGGATTTGTTTACGGGATAATTCCCGAGAAAGGAAAGCCAGTGACCGGGGCATCGGATAATCTCCGTGAATGGTGGAAGGATAAGGTCAGGTTCGATCGCAACGGTCCTGCTGCCATATCCAAGTACCAAGCAGATAATGCGATTCCGGGGAAGAATGATGGAAGCAATCCGATCGGTCCAACCCCTCATACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTATCGGCACTTATGCAACACTGTGATCCCCCTCAGAGGCGGTTTCCATTGGAGAAGGGTGTTCCTCCTCCATGGTGGCCAACAGGTAATGAAGAGTGGTGGCCCCAAATCGGTTTACCGAAGGATCAAGGTCGTCCGCCTTACAAGAAACCTCATGATCTGAAGAAGGCGTGGAAGGTTGGAGTTCTGACAGCAGTTATCAAGCACATGTCTCCCGACATTGCAAAAATTCGCAAGCTTGTGAGGCAGTCCAAATGCCTCCAAGATAAAATGACGGCTAAGGAAAGTGCAACCTGGCTTGCAATCGTCAATCAAGAGGAGGCAATAGCGCGAGAGCTGTATCCTGATTATGTCCCCCCATTTACATCTGTTGGAGGAAGTGGATCTTATGCCACCAATGACGGCACCGAGTACGATGTTTATGGGGGAGACGATGGGCCAAATTTTGATGTGGAGGAACGGAAACCTGAGAATCTTCTTCATGCATCCAACATCGGGATAATGGAGCGAATGAGGGGTGTAAGACTGCCAATTCAGCAGCCTTCTTTCCCAATGAATGGAGAGGCTGTAACAAACATGGATTTCATGCGGAAGAGGAAGATCTCTGGTGAATTTAACATGATAATGGATCAGAAAGTTTTTACTTGCGAACACTCTATGTGTCCTTATAGCGAAGCTCGTATTGGTTTTCAGGACAGAACTTCTAGGGACAATCATCAATTGAATTGTCCATATAGAGCCACTTCATCAGATTATGGTGGTCCAAGTTTTCATGCTAATGAGGTAAAACCAGTAATATTCCCTCAGTCCTTTGTTCAACCGAAACCTACTGCTCATTCGGTTAATATGGTTGTTCCACCATCCATTGATCTAACTGGACTCGGAGTTTCAGAAGATGGTGAGAAAAATATTGGTGACCTTATGACAGTATATGATACAGATGTTCATCAAGACAGCAGGAATTTAAGTTCCGGTAATCACATAACTCCGGTGTTAAATCAGAACATACCGCAACCTAGCAGGGTTCAGCAGCAGCAGCAACCTCAGAATTTCTTCGGCAGTCAAGGAATGGTGATGGAGGGAAACTTGTTTGAAGAAACCAACATGTCGAATAATAACCATAACCATCATCACCAAATGTTTGCAAGAGATCATGAAGGTCAATTTGACCGGTTCAAAGCTTTGAATTCTCCCTTTGAGAACAATCACAATCACAATCACAATCACCATCAAAACAACATCAATAATAATAATTTCCATTTAATGTTTGGGTCCCCTCAGTGTGATTTAACATCCTTTGATTTTAAGGAGGATATGCATCATGGCCATGGAGTAGGCATTGATCCTATTCAAAAACAGCAAGATATTTCAGTATGGTACCCTTGA 1953 0.4465 MMMMYDEMALSGDLDVFSAPVVEEDITARQTEPEAIVDEDFSDEEIDVEELERRMWKDKMRLKRLKEQVKPKDGLDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAISKYQADNAIPGKNDGSNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKDQGRPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEAIARELYPDYVPPFTSVGGSGSYATNDGTEYDVYGGDDGPNFDVEERKPENLLHASNIGIMERMRGVRLPIQQPSFPMNGEAVTNMDFMRKRKISGEFNMIMDQKVFTCEHSMCPYSEARIGFQDRTSRDNHQLNCPYRATSSDYGGPSFHANEVKPVIFPQSFVQPKPTAHSVNMVVPPSIDLTGLGVSEDGEKNIGDLMTVYDTDVHQDSRNLSSGNHITPVLNQNIPQPSRVQQQQQPQNFFGSQGMVMEGNLFEETNMSNNNHNHHHQMFARDHEGQFDRFKALNSPFENNHNHNHNHHQNNINNNNFHLMFGSPQCDLTSFDFKEDMHHGHGVGIDPIQKQQDISVWYP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02621 650 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Trre5g02621 650 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 4 628 IPR006957 GO:0003700|GO:0005634
Trre5g02621 650 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Trre5g02621 650 MobiDBLite consensus disorder prediction 67 92 - -
Trre5g02621 650 FunFam Ethylene insensitive 3-like 1 170 306 - -
Trre5g02621 650 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
Trre5g02621 650 Pfam Ethylene insensitive 3 49 296 IPR047091 GO:0003700
Trre5g02621 650 FunFam Ethylene insensitive 3-like 1 81 159 - -
Trre5g02621 650 Coils Coil 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02621 Trre-Chr5 20522447 20524399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02621 3 649 EIL Transcription Factor Family AT3G20770 59.361 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trre5g02621 EIN3 1.4e-129 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02621 5 20522447 20524399 Trre9g04665 9 53629308 53631161 PCT