Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01709 ATGAAGAGGTTCCATACTAAGAATCATGATGAACTTGTGTCGGTTTCTAACACTCGTTCTTCCTCAATTTCCAACAGAAAATGTTCTCTTTTCACTTCAACTCGCTTCTTCGCTTCTCTCTTTGTTATCACTCTCTTTCTCTTCTCTCTCTCCTTCATTCTTCCATCTTCTCCACCAACAACTACTGCTACTACTACTCTCAATCTCAAACAAACTCAACAACATGGTTTGAACAATGATGCTTCTGATTCTGGTGAGTTCATAAAAGATAAACTACTTGGTGGACTTCTAGCAGCTGGATTTGACGATAAATCATGTCTAAGCAGGTATCATTCAGTTAAAGGCCTATCAGGAAATCCATCTCCGTACCTCATTTCTAGATTACGAAAATATGAAGCTCTCCACAAAAAATGCAGACCATATACTGAATCCTACAATAAAACGGTGAAAGATCTCGGTTCTGGTCACTTAAGTGAGTCACCAGATTGTAAATACGTAGTTTGGATTTCATTTAGTGGTTTAGGGAACAGGATATTGACCTTAGCCTCTGCGTTTCTTTATGCGCTCCTTACAAACCGGGTTCTTTTGGTTGATCCTGGAGTTGATATGGTCGAACTCTTTTGTGAACCGATTCCAGATGTTTCCTGGTTTCTCCCTCCTGATTTCCCTCTAACCAGTCAATTTCATAGTTTCAATCAGAAATCTGATCACTGTCATGGAAAAATGCTGAAAAATAAAGCAGTCACAAATTCAAAAGTGCTTTCTTCTGTCTACCTTCATTTGGTGCATGATTATGATGATGATGATAAGCTTTTCTTCTGCGATGAAGAACAAAAGTTTCTGCAGAAAGTACCTTGGTTAATGATGAGAACAGATAATTACTTTATTCCATCGCTATTCTTGATGCCGTCTTTTGATCAGGAGCTCGGTAATCTCTTTCCTAACAAGGAAAAAGTTTTCCATTTCTTAGGCAGGTATTTGTTTCACCCTACAAACAAAGTATGGGGATTTGTTACTAGATACTATCAAGCTTATTTAGCTAATGCTGATGAAAGAGTCGGCATCCAGATTAGGGTTTTCGACACGAGACCCGGTCCATTTCAATATGTACTGGATCAAATCTTAGCTTGTACTATGAAGGAGAATATCTTGCCTAATGTTGACAAGAAGCATGATATTATCAGTTCATTAGGAAATTCAAAGTCGAAAGCGGTGCTAATGACATCCTTAAATTCTGGTTATTTTGAAAAAATAAGAGACATGTATTGGGAATATCCAACGGTGACAGGAGAAGTTATCAGTGTTTCACAACCAAGCCATGAGGGACATCAACAAACTGAGAAGCAAACACACAACCAAAAAGCTTGGGCAGAAATGTATCTATTGAGTTTAACCGATGTGTTGGTGACTAGCTCATGGTCTACTTTTGGCTATGTAGCGCAAGGGCTCGGAGGTCTGAAACCTTGGATACTATACAAACCAGAGAATGAAACAGCGCCTAATCCTCCATGTCGTCGTGTGATGTCGATGGAGCCGTGTTTTCATGCTCCTCCTTTCTATGATTGTAAGGCTAAGAGAGGAACTGATACAGGTGCACTTGTTCCACATGTAAGACATTGTGAGGATATGAGTTGGGGTCTTAAGCTTGTAGACAATTAG 1659 0.393 MKRFHTKNHDELVSVSNTRSSSISNRKCSLFTSTRFFASLFVITLFLFSLSFILPSSPPTTTATTTLNLKQTQQHGLNNDASDSGEFIKDKLLGGLLAAGFDDKSCLSRYHSVKGLSGNPSPYLISRLRKYEALHKKCRPYTESYNKTVKDLGSGHLSESPDCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMVELFCEPIPDVSWFLPPDFPLTSQFHSFNQKSDHCHGKMLKNKAVTNSKVLSSVYLHLVHDYDDDDKLFFCDEEQKFLQKVPWLMMRTDNYFIPSLFLMPSFDQELGNLFPNKEKVFHFLGRYLFHPTNKVWGFVTRYYQAYLANADERVGIQIRVFDTRPGPFQYVLDQILACTMKENILPNVDKKHDIISSLGNSKSKAVLMTSLNSGYFEKIRDMYWEYPTVTGEVISVSQPSHEGHQQTEKQTHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENETAPNPPCRRVMSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMSWGLKLVDN 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01709 552 Gene3D - 337 502 - -
Trre5g01709 552 FunFam Galactoside 2-alpha-L-fucosyltransferase 161 212 - -
Trre5g01709 552 PANTHER FUCOSYLTRANSFERASE 2-RELATED 36 551 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre5g01709 552 Pfam Xyloglucan fucosyltransferase 66 523 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre5g01709 552 Gene3D - 161 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01709 Trre-Chr5 12479106 12481699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01709 34 550 Xyloglucan Fucosyltransferase1 AT2G03220 61.731 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01709 K13681 - gmx:100800258 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01709 5 12479106 12481699 Trre5g01709 5 12479106 12481699 ECH