Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00627 ATGGATCCCAAAGTTGATAATGATTTTGTCACTGGCCCTTCAAAGGGAGAAGCCTCAAACAAGGCAAAAGGAAAGGAAAAAGAAAAGGAAGAAGGTGGTGACAAAAAAGAATTAGATATTGAGGAACTAGAGACAAGGATATGGAGAAATAAAAAGCTCTTAAAGAGGTTGAAGGAAGAAAGAGCACAAAGAGACTATGGTTATTCATTGGAACAATTGGAAAAAATGAAAAGAAAAACAATGTTTCGTGCACAAGATGGTGTATTAGGGTACATGTTAAAGATGATGGAAGTATGTAATGCTCATGGATTCGTGTATGGTATAGTACTTGAAGATGGAAGAACAGTAAGTGGATCATCGGAAAATCTACGAGCTTGGTGGAAAGAGGAAGTGAAGTTTGATAAAAACAGTTCAGCTGCAATTTCGAAGTATGATGAAGAAAATGGAATTTCATCAATGAATGAGGCTAATCTTCCTCATGATGATGGAAGTGCTCTTGTTGAAAGTGATGGAGAATTGAGACAAGTTCAAGTTCAACCAAATTCAAATAGTGATGATGTGTCTCCAATGAACAATCTTGTTGAAAGTGATGGAGAATGGAGACAAGTTCAAGTTCAACCAAAGTTCAATAGTGTTGATGTGTCTCCAATGAACAATCTTGTTCAAAGTGATGGAGAATGGAGACAAGTTCAAGTTCAACCAAATTTCAAAAGTGATGATGTGTCTCCAATGAACAGTCTTGTTGAAAGTGATGATGTGTCTCCAATGAACAATCTTGTTCAAAGTGGTGGAGAATGGAGACAAGTTCAAGTTCAACCTAATTTGAATAGTGTTGATGTGTCTCCAATGAACAATCTTGTTGAAAGTGGTGGTAATAAGAGAAAGGTTGATGAACTTGTTGAAAGCACAACTACTACAAAAAACAATGAGGGTTATACTTGTATTAATCCTCAACTTCAATACTATAATCAAGGTGGTGATGTTAACAATTCATCACATACCAACTTTTCTTCTATTATTCCACCTTATGAGGTTGTTGCTAACAAGAGAAAATGTGAAGTTGGTATGAGATATAACAACCAATTGCAACAAGATATGAATGTAAGAAACAATCACCACTTTGCCAGCCCAACAATAGGAAGCAGCAGCAGCGGCGGCATCAATAACAACCAATTGCAAATGGTTGATGTTGGAGGATCAAACACTCATCAACATGCTGCACCTCTTGATCAACATGTGCAAGTTGCACTACCTGTTGTTGATCACCATGCTGCACCTCTTGATCAACATGTCCAAGATGCACTCCCTATTGTTGCAAATCATACAGGTAATTACTCTGGAGGAGGAGGAGAAGGGGATTTGATGGATATTTATTATTCAGGTCTTCGGCTGAAGAAAAATGATGCTGTGCATGTTGGAGCTCATGGAAACCCTAACTCCTCTCCTAACTACCAAGTGCCTAATGCTGTTGTTGGAGCTACTGTTCCAATGCATCAAAGTGTGTCAACAGCAACCATTGAAGATTTGAGGGCATACAATTCTCCATTTGATGTTGAAGATTACAACAATTATGGATTTAGTGGTTCTTCTTCTAATGTGCAAACACCAAGTTATGATTTCTCTTGGTTCTACAATAAAGAGAATTAA 1647 0.3752 MDPKVDNDFVTGPSKGEASNKAKGKEKEKEEGGDKKELDIEELETRIWRNKKLLKRLKEERAQRDYGYSLEQLEKMKRKTMFRAQDGVLGYMLKMMEVCNAHGFVYGIVLEDGRTVSGSSENLRAWWKEEVKFDKNSSAAISKYDEENGISSMNEANLPHDDGSALVESDGELRQVQVQPNSNSDDVSPMNNLVESDGEWRQVQVQPKFNSVDVSPMNNLVQSDGEWRQVQVQPNFKSDDVSPMNSLVESDDVSPMNNLVQSGGEWRQVQVQPNLNSVDVSPMNNLVESGGNKRKVDELVESTTTTKNNEGYTCINPQLQYYNQGGDVNNSSHTNFSSIIPPYEVVANKRKCEVGMRYNNQLQQDMNVRNNHHFASPTIGSSSSGGINNNQLQMVDVGGSNTHQHAAPLDQHVQVALPVVDHHAAPLDQHVQDALPIVANHTGNYSGGGGEGDLMDIYYSGLRLKKNDAVHVGAHGNPNSSPNYQVPNAVVGATVPMHQSVSTATIEDLRAYNSPFDVEDYNNYGFSGSSSNVQTPSYDFSWFYNKEN 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00627 548 Gene3D - 71 151 IPR023278 GO:0003700|GO:0005634
Trre5g00627 548 MobiDBLite consensus disorder prediction 19 36 - -
Trre5g00627 548 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 28 151 IPR006957 GO:0003700|GO:0005634
Trre5g00627 548 Pfam Ethylene insensitive 3 41 166 IPR047091 GO:0003700
Trre5g00627 548 MobiDBLite consensus disorder prediction 1 36 - -
Trre5g00627 548 Coils Coil 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00627 Trre-Chr5 4154017 4157724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00627 37 159 EIL Transcription Factor Family AT3G20770 53.968 4.97e-38 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trre5g00627 EIN3 1.2e-42 No_clan