Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00270 ATGGGTGCAGGTGAAGATCTTGTAAACAGTGCAGATAGTACTGCCGAGGGTCCTGTAAACCACGGCACTGGTACTGCAGAAAATCCTGTAACTAACAAAGGAGATTCTTCTGAAAATTCTAAAAACAACCAGGCGGCTGATGTGGAAAATCCTACAAATGACCAACCAAATAGCGCAGTAAGTCCTGTAAGCAACCAGGCAGTTGGTTCAGAAAATCCTGCTAATGAGCAACCAAAGGATGCACTAGATCCTTTAAATAACCAAGCAGGTGGGGCAGTAAATCCTGTAAACGACCAGGCACTTGTTGAAACTCCTATAAATAACAAAACATGTGGTGCAGAAGACCTTATAGGCGACCAATCTAATGACCACTTAAATGTTGCAGAAAATTCTGTAAACGACCAAGCACATTTTGAAACTCCTATAAATAACAAAACACGTGGTGCAGAAGACCTTGTAGGCGACCAATCAAATGACCACTTAAATGTTGCAGAAAATCATTCAAACGACCTAGTAGGTGGTGCAGCAAATCCCTTACACGACCAAGAAGGTTCTTTAAATGACACAGCAGGTGGTACGGTAGATACCGTAAATGATAAAGCAGGTGGTGCAGAAACACCTGCAAATGACCAATTAAATGCTGCAGAAAATCTCGCAGACGATAGAGCACATGCTGCAAAAATTTCTACAAATGATATCACAGGTGATGATGAAACAGAAAATTCCACGAAAGACAATACAGGTGATGTCCAAATTCCGGTAAACAATGAAGCTGATGCTGTAGAAAATCCTTTAGACGACAAACAAGATGCTGCAAAAAATCTTGTAGAAGAGAAAGCAGATGCCATTGCAACCTCGTCAAACAGCAAAGAAGATACCGTTGAAACACCTAACAGAGCAGACCGCCTTCCAGCAGAAGCAAAGGAGATACTTATATCTTTGGCAGGTAAATGGGAGGATGTACTAGATGCAAGTGCATTGCAGGTGATTCCTCTCAAGGGGGCAATGACGAATGAGGTATTCCAAATAAAGTGGCCAGCTACAACTGGGGAAACCTCACGAAAGGTTGTAGTTAGAATCTATGGTGAGGGTGTGGAGATTTTCTTTGACAGGGATGATGAAATACGGACATTTGAATACATGTCGAAGAATGGTCAAGGACCTCGTCTACTAGGACGTTTTACAAATGGACGTGTTGAAGAGTTTATCCACGCACGGACATTGTCAGCTCCTGATCTACGGGATCCTTCTATTTCTGCTCTTATAGCGGCCAAATTGAAGGAGTTTCATAATCTAGATATGCCTGGTGAAAAGAAAGTCAATCTTTGGTGTACATTGAGAAATTGGCTTATCGAGGCCAAACGTTTGTCTTCACCAAAGGAAGTTGAAGCTTTTTATTTGGACACAGTCGACAAGGAAATCTCTATTTTGGAAAAGGAACTATCAGGCACACACCAGCAGATAGGATTTTGCCACAATGATTTACAATATGGTAACATAATGCTTGATGAAGAGACCAATTCTGTGACCATAATAGACTATGAATATGCAAGTCACAATCCTGTAGCGTACGATATAGCAAACCACTTCTGTGAGATGGCTGCGAACTATCATACAGAAACACCTCATATTCTTGATTACAGCAAATATCCTGACTTTGAGGAGCGTGCAAGATTTATTAAAGCATATTTGAGTTCCTCGGGTGAACAACCAAGTGAGAGTGAAGTGGAGCACCTACTTCAAGAAGTTGAGAAGTATACACTTGCAAATCATCTATTCTGGGGACTTTGGGGAATAATATCGGGACAAGTGAACACAATTGAATTTAACTACAAGGAGTATGCCAAACAGAGGTTTCAAGAGTATTGGGCAAGGAAACCTTATCTTCTGAGCTCTGATGCACCTTCTCCCTTTAATGCCCCTGAGGGTACAGGAGAGCTTGCATCCACAGCACACACCAAAGGACATTCATCGAAGAACTCTGGTATCTTCAGGAAGATGAAGAGAGTTTTGGGTCTTGGCTTGTTCAGGTCGAAAAGCTAA 2043 0.4175 MGAGEDLVNSADSTAEGPVNHGTGTAENPVTNKGDSSENSKNNQAADVENPTNDQPNSAVSPVSNQAVGSENPANEQPKDALDPLNNQAGGAVNPVNDQALVETPINNKTCGAEDLIGDQSNDHLNVAENSVNDQAHFETPINNKTRGAEDLVGDQSNDHLNVAENHSNDLVGGAANPLHDQEGSLNDTAGGTVDTVNDKAGGAETPANDQLNAAENLADDRAHAAKISTNDITGDDETENSTKDNTGDVQIPVNNEADAVENPLDDKQDAAKNLVEEKADAIATSSNSKEDTVETPNRADRLPAEAKEILISLAGKWEDVLDASALQVIPLKGAMTNEVFQIKWPATTGETSRKVVVRIYGEGVEIFFDRDDEIRTFEYMSKNGQGPRLLGRFTNGRVEEFIHARTLSAPDLRDPSISALIAAKLKEFHNLDMPGEKKVNLWCTLRNWLIEAKRLSSPKEVEAFYLDTVDKEISILEKELSGTHQQIGFCHNDLQYGNIMLDEETNSVTIIDYEYASHNPVAYDIANHFCEMAANYHTETPHILDYSKYPDFEERARFIKAYLSSSGEQPSESEVEHLLQEVEKYTLANHLFWGLWGIISGQVNTIEFNYKEYAKQRFQEYWARKPYLLSSDAPSPFNAPEGTGELASTAHTKGHSSKNSGIFRKMKRVLGLGLFRSKS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00270 680 MobiDBLite consensus disorder prediction 227 244 - -
Trre5g00270 680 Pfam Choline/ethanolamine kinase 353 554 - -
Trre5g00270 680 MobiDBLite consensus disorder prediction 168 210 - -
Trre5g00270 680 MobiDBLite consensus disorder prediction 13 73 - -
Trre5g00270 680 MobiDBLite consensus disorder prediction 1 93 - -
Trre5g00270 680 SUPERFAMILY Protein kinase-like (PK-like) 297 629 IPR011009 -
Trre5g00270 680 MobiDBLite consensus disorder prediction 640 660 - -
Trre5g00270 680 MobiDBLite consensus disorder prediction 227 255 - -
Trre5g00270 680 Coils Coil 265 285 - -
Trre5g00270 680 Gene3D - 362 623 - -
Trre5g00270 680 CDD ETNK_euk 327 625 - -
Trre5g00270 680 PANTHER CHOLINE/ETHANOALAMINE KINASE 288 632 - -
Trre5g00270 680 Gene3D Phosphorylase Kinase; domain 1 316 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00270 Trre-Chr5 1648312 1652233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00270 298 632 Acyl Lipid Metabolism Gene Families AT1G74320 68.358 1.50e-176 505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g00270 5 1648312 1652233 Trre5g00270 5 1648312 1652233 ECH
Trre5g00270 5 1648312 1652233 Trre15g01523 15 12068966 12072270 PCT