Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00184 ATGGATGATGGAGAGGCATTGTTGAAGAAAAAATACTATGAGAATTGTCCTGGTTGTAAAGTGGACAAAGCAAAAGAGCTCAAAACTGATGTTTCATTTCGAAATCTCTTGAACATATGGATGGTTGTTTTATGCAGTGCTTTGCCTATATCATCTCTCCTTCCTTACCAATATTTCATGATAAGAGATTTCAATATTGCAGACAGAGAAGAGGATATAAATGCTTATGCTGGTTATGTAGGATCTGCATTCATGCTTGGAAGATCTTTGACATCTATACCATGGGGCATTGTAGCAGATCGTTATGGTAGAAAACCTGTTGCGATTGCAGGAATTATCTCAGTTATCATTTTCAACACACTATTTGGCCTTAGCACAAGTTTTTGGATGGCTGTGTCTACGCGGTTTTTCCTTGGAAGTTTAAATGGTTTGCTTGGACCAATGAAGGCTTACTGCTCCGAAATTTTTCGAGAAGAAAAGCAAGCTCTTGGACTTTCAACTTTCAGTGCAGCATGGGGGATGGGTTTAATAATTGGGCCAGCATTGGGAGGCTATTTGGCTCAGCCAACAAAGAAATATCCAAATATATTTCCAAGGGATTCCTTTTGGGATAAGTTTCCATATTTCTTGCCTTCCATTTTAATATCAGCTTTTGCGGTTGCGGTTGCAATTGCCTGCATCTGGCTTCCGGAAACACTGCACAACCACCCTCTTGGCGATCAGTCCACTAATGATGTTGAAGCTTTAGAAACTGGAAGCAAAAGGAAAGACAGAGATAAGAAAATCCAAAGAGATGAAAACCTCTTCCTAAACTGGCCTTTAATGTCATCTATAGTTGTGTACTGCATTTTCTCACTTCATGATATTGCATATCAAGAGGTTTTCTCATTATGGGCTGTTAGTCCTAGAAAGTTCGGTGGTTTGGACTTTACAACCGATAATGTTGGTGATGTTCTCGCAATATCAGGTTTTGCTCTTATTGTTTACCAGCTTTGCGTATACCCATCATTGGAAAGAGCTTTTGGACCTGTAAGATTTGCTCGCATCTCCGGGGTTCTATCTATACCTCTTTTGCAAAGTTACCCTTTCATAGCAATGCTGTCAGGCATCACACAGTATCTAGTGATTAATATTGCATCCCTTCTAAAGAATCTTCTAAGGGTGACTATAATCACTGGTTTATTTCTTATACAAAATAGAGCAGTGGAACAACATCAAAGAGGGGCAGCTAATGGTATTGCCATGACTGGTATGTCCATATTCAAAACAATTGGTCCAGCTGGTGGTGGTGCATTATTAGCTTGGTCACAAAAACGGATGCATGCATTTTTCCTCCCCGGCACTCATATGGTTTTCTTTATCCTGAACGTTGCTGGAGGACTTGGAGTGCTATTGATGTTTACACCATTTCTGACTGAAAAGAAGAAAACACCATCTGAGCAGTTACACTAA 1452 0.3988 MDDGEALLKKKYYENCPGCKVDKAKELKTDVSFRNLLNIWMVVLCSALPISSLLPYQYFMIRDFNIADREEDINAYAGYVGSAFMLGRSLTSIPWGIVADRYGRKPVAIAGIISVIIFNTLFGLSTSFWMAVSTRFFLGSLNGLLGPMKAYCSEIFREEKQALGLSTFSAAWGMGLIIGPALGGYLAQPTKKYPNIFPRDSFWDKFPYFLPSILISAFAVAVAIACIWLPETLHNHPLGDQSTNDVEALETGSKRKDRDKKIQRDENLFLNWPLMSSIVVYCIFSLHDIAYQEVFSLWAVSPRKFGGLDFTTDNVGDVLAISGFALIVYQLCVYPSLERAFGPVRFARISGVLSIPLLQSYPFIAMLSGITQYLVINIASLLKNLLRVTIITGLFLIQNRAVEQHQRGAANGIAMTGMSIFKTIGPAGGGALLAWSQKRMHAFFLPGTHMVFFILNVAGGLGVLLMFTPFLTEKKKTPSEQLH 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00184 483 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 31 468 - -
Trre5g00184 483 Pfam Major Facilitator Superfamily 39 285 IPR011701 GO:0022857|GO:0055085
Trre5g00184 483 ProSiteProfiles Major facilitator superfamily (MFS) profile. 35 474 IPR020846 GO:0022857
Trre5g00184 483 SUPERFAMILY MFS general substrate transporter 34 476 IPR036259 -
Trre5g00184 483 FunFam Protein ZINC INDUCED FACILITATOR-LIKE 1 34 466 - -
Trre5g00184 483 CDD MFS_SLC46_TetA_like 39 467 - -
Trre5g00184 483 Gene3D MFS general substrate transporter like domains 30 468 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00184 Trre-Chr5 1119152 1125087 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g00184 5 1119152 1125087 Trre15g01581 15 12694330 12697930 PCT