Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03783 ATGGGAAAAATGGCTCATAAGAACGTTATTACAATTGGAGGACCAAATGTTGCAACTAATGAATTTGGATTGAAATCAAATGTAACACTTGACAACTTTGGAGGAAGAAACAAGAGTGATCTCAATATCAAAAGCTCCAAGAATATTCCATTGGCAAATTCAACTTCAACTCCATCTAAAGAGATCACTGATGATGAGAAAGACAAATTGCTTGAAGGACTATTAGTTTCTGGATTTGATGAAGCATCATGCATAAGCAGGTCACAATCACATTTCTACCACAAACCTTCTCCTCACAAACCTTCCCCATATTTGATATCTAAACTGAGAAAATATGAAGAACTTCATAGAAAATGTGGACCTAACACTAGAGCTTACAATAGAGACATGAAAATTATTGCAAACTCTAACGAAAACAATACAATTTCTGCTGCAACAACTTGCAAATACATTATTTGGTTACCTAGTAGAAGTGGTTTAGGTAACCAAATAATTAGCATGGCTTCATCATTTCTTTACGCACTCCTAACGAATCGTGTTTTGATCGTACAATTTGGAAAAGACAAAGAAGGTTTATTTTGCGAACCTTTAATAAATTCAACATGGCTACTATCGGAGAATTCCCACTTTTGGTATGCGCGAAATGTTGTAAAATATCAAGGCATAACTGAGATGGAAATGACTAATACATTATATCAATATTTGCCATCAGCTATGCATGTGAATCTAGGATACAGTCCTAAACAGGATGAGAGATTTTTTCACTGTGACCATAGTCAATTTCTTCTCAGTAAAATACCTCTGGTGTTTTTGGCGGCAAATCAATATTTTGTACCTTCATTTTTCATGACACCAATTTTCGAAGAAGATTTAAGCAAAATGTTTCCAGAAATTACCTCAATTTTTCACCATTTGGGACGCTATTTATTTCACCCTGCAAATGAAGCATGGGAACTAATTACTAGTTTCTATCAACAACACCTTGATAAAGCAAATGAGAGAATTGGGCTTCAAGTAAGAGTGATTAATCCTAATTCAACACCACACCAAGTTGTTATGAATCAAATTTTGAATTGCACATTAGAGAATAAGTTACTTCCAAAAGTTATTGGTACAAAAAATATGTCAGTATCATCTACCGACAAAAACAAGATGATTAAAAAGGTTGTTCTTGTGACATCTTTATATTCACAATATGGAAAGAATCTAAAGAAGATGTATCAGAATAAATCAACAGTTACCGGAGAAGTAATTGAGGTTTATCAACCAAGTAGTGAAAATCAACAAAAAATTGGTGATAGGAAGCAAAATTTGAAGGCTTGGGTTGAAATGTATTTACTAAGTTTATCTGATGTGTTGGTGACTACACATCAATCAACTTTTGGTTATGTTGCTAAGGCTTTGGGGAATTCAATACCATGGATTTTTTACAATCCGGTTTATAATCAAACTAAGGAGATTTGTGAACGTAAGTTTACATATGAGCCATGTATTGAAAATAAAGAGATTTGTGAACGTGAGTTTACATTAGAACCTTGTTATCATTATCCTCCTTTACATTATTGTGATGGAAAGGTTATTGAAGATGTTGCTTCTTCTTTTCATAATATTAGACATTGTAAGGATTTTCCTTTTGGTTTAAAGCTCGTTAACAGTTCTATTTAG 1665 0.3321 MGKMAHKNVITIGGPNVATNEFGLKSNVTLDNFGGRNKSDLNIKSSKNIPLANSTSTPSKEITDDEKDKLLEGLLVSGFDEASCISRSQSHFYHKPSPHKPSPYLISKLRKYEELHRKCGPNTRAYNRDMKIIANSNENNTISAATTCKYIIWLPSRSGLGNQIISMASSFLYALLTNRVLIVQFGKDKEGLFCEPLINSTWLLSENSHFWYARNVVKYQGITEMEMTNTLYQYLPSAMHVNLGYSPKQDERFFHCDHSQFLLSKIPLVFLAANQYFVPSFFMTPIFEEDLSKMFPEITSIFHHLGRYLFHPANEAWELITSFYQQHLDKANERIGLQVRVINPNSTPHQVVMNQILNCTLENKLLPKVIGTKNMSVSSTDKNKMIKKVVLVTSLYSQYGKNLKKMYQNKSTVTGEVIEVYQPSSENQQKIGDRKQNLKAWVEMYLLSLSDVLVTTHQSTFGYVAKALGNSIPWIFYNPVYNQTKEICERKFTYEPCIENKEICEREFTLEPCYHYPPLHYCDGKVIEDVASSFHNIRHCKDFPFGLKLVNSSI 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03783 554 PANTHER FUCOSYLTRANSFERASE 2-RELATED 59 551 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre4g03783 554 Pfam Xyloglucan fucosyltransferase 57 522 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre4g03783 554 FunFam Galactoside 2-alpha-L-fucosyltransferase 146 198 - -
Trre4g03783 554 Gene3D - 145 248 - -
Trre4g03783 554 Gene3D - 318 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03783 Trre-Chr4 45768159 45770845 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03783 62 550 Xyloglucan Fucosyltransferase1 AT2G03220 43.400 1.43e-139 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03783 K13681 - gmx:100809919 574.704