Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03782 ATGGAAGCATATTCCACGAGACTCAAAGTATCCTTTATTGTGAGTTTGGTAGCTTCATCTATATTTACCATGGTTACCTTAATGGACCAAAACTCTTGTTTTGGGCTAATTAAAGGGTTTTCAAAAGACATGGCAATGGGAAAAATGGCTCATAAGAACGTTATTACAATTGGAGGACCAAATGTTGCAACTAATGAATTTGGATTGAAATCAAATGTAACACTTGACAACTTTGGAGGAAGAAACAAGAGTGATCTCAATATCAAAAGCTCCAAGAATATTCCATTGGCAAATTCAACTTCAACTCCATCTAAAGAGATCACTGATGATGAGAAAGACAAATTGCTTGAAGGACTATTAGTTTCTGGATTTGATGAAGCATCATGCATAAGCAGGTCACAATCACATTTCTACCACAAACCTTCTCCTCACAAACCTTCCCCATATTTGATATCTAAACTGAGAAAATATGAAGAACTTCATAGAAAATGTGGACCTAACACTAGAGCTTACAATAGAGACATGAAAATTATTGCAAACTCTAACGAAAACAATACAATTTCTGCTGCAACAACTTGCAAATACATTATTTGGTTACCTAGTAGAAGTGGTTTAGGTAACCAAATAATTAGCATGGCTTCATCATTTCTTTACGCACTCCTAACGAATCGTGTTTTGATCGTACAATTTGGAAAAGACAAAGAAGGTTTATTTTGCGAACCTTTAATAAATTCAACATGGCTACTATCGGAGAATTCCCACTTTTGGTATGCGCGAAATGTTGTAAAATATCAAGGCATAACTGAGATGGAAATGACTAATACATTATATCAATATTTGCCATCAGCTATGCATGTGAATCTAGGATACAGTCCTAAACAGGATGAGAGATTTTTTCACTGTGACCATAGTCAATTTCTTCTCAGTAAAATACCTCTGGTGTTTTTGGCGGCAAATCAATATTTTGTACCTTCATTTTTCATGACACCAATTTTCGAAGAAGATTTAAGCAAAATGTTTCCAGAAATTACCTCAATTTTTCACCATTTGGGACGCTATTTATTTCACCCTGCAAATGAAGCATGGGAACTAATTACTAGTTTCTATCAACAACACCTTGATAAAGCAAATGAGAGAATTGGGCTTCAAGTAAGAGTGATTAATCCTAATTCAACACCACACCAAGTTGTTATGAATCAAATTTTGAATTGCACATTAGAGAATAAGTTACTTCCAAAAGTTATTGGTACAAAAAATATGTCAGTATCATCTACCGACAAAAACAAGATGATTAAAAAGGTTGTTCTTGTGACATCTTTATATTCACAATATGGAAAGAATCTAAAGAAGATGTATCAGAATAAATCAACAGTTACCGGAGAAGTAATTGAGGTTTATCAACCAAGTAGTGAAAATCAACAAAAAATTGGTGATAGGAAGCAAAATTTGAAGGCTTGGGTTGAAATGTATTTACTAAGTTTATCTGATGTGTTGGTGACTACACATCAATCAACTTTTGGTTATGTTGCTAAGGCTTTGGGGAATTCAATACCATGGATTTTTTACAATCCGGTTTATAATCAAACTAAGGAGATTTGTGAACGTAAGTTTACATATGAGCCATGTATTGAAAATAAAGAGATTTGTGAACGTGAGTTTACATTAGAACCTTGTTATCATTATCCTCCTTTACATTATTGTGATGGAAAGGTTATTGAAGATGTTGCTTCTTCTTTTCATAATATTAGACATTGTAAGGATTTTCCTTTTGGTTTAAAGCTCGTTAACAGTTCTATTTAG 1800 0.3344 MEAYSTRLKVSFIVSLVASSIFTMVTLMDQNSCFGLIKGFSKDMAMGKMAHKNVITIGGPNVATNEFGLKSNVTLDNFGGRNKSDLNIKSSKNIPLANSTSTPSKEITDDEKDKLLEGLLVSGFDEASCISRSQSHFYHKPSPHKPSPYLISKLRKYEELHRKCGPNTRAYNRDMKIIANSNENNTISAATTCKYIIWLPSRSGLGNQIISMASSFLYALLTNRVLIVQFGKDKEGLFCEPLINSTWLLSENSHFWYARNVVKYQGITEMEMTNTLYQYLPSAMHVNLGYSPKQDERFFHCDHSQFLLSKIPLVFLAANQYFVPSFFMTPIFEEDLSKMFPEITSIFHHLGRYLFHPANEAWELITSFYQQHLDKANERIGLQVRVINPNSTPHQVVMNQILNCTLENKLLPKVIGTKNMSVSSTDKNKMIKKVVLVTSLYSQYGKNLKKMYQNKSTVTGEVIEVYQPSSENQQKIGDRKQNLKAWVEMYLLSLSDVLVTTHQSTFGYVAKALGNSIPWIFYNPVYNQTKEICERKFTYEPCIENKEICEREFTLEPCYHYPPLHYCDGKVIEDVASSFHNIRHCKDFPFGLKLVNSSI 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03782 599 Gene3D - 190 292 - -
Trre4g03782 599 FunFam Galactoside 2-alpha-L-fucosyltransferase 191 243 - -
Trre4g03782 599 PANTHER FUCOSYLTRANSFERASE 2-RELATED 34 596 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre4g03782 599 Pfam Xyloglucan fucosyltransferase 102 567 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre4g03782 599 Gene3D - 363 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03782 Trre-Chr4 45768024 45770845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03782 107 595 Xyloglucan Fucosyltransferase1 AT2G03220 43.400 1.49e-139 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03782 K13681 - gmx:100809919 585.489