Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03901 ATGGAAGCATATTCCACGAGACTCAAAGTATCCTTTATTGCGAGTTTGGTAGCTTTGTCTATATTTACCATGGTTACCTTAATGAACCAAAACTCTAGTTTTGGGCTAATTAAAGGGTTTTCAAAAGACATGGCAATGGGAGAAAAGGCTCATAAGAACGTTATAATTGGAGGACCAAATGTTGCAACTAATGAATTTGGATTGAAATCAAATGTAACATTTGACAACTTTGGAGGAAGAAACAAGAGTGATTTCAATATCAAAAGTTCCAAGAATATTCCATTGGCAAATTCAACTTCAACTCCATCTAAAGAGATCACTGATGATGAGAAAGACAAATTGCTTGAAGGACTATTAGTTTCTGGATTTGATGAAGCATCATGCATAAGCAGGTCACAATCACATTTATACCACAAACCTTCTCCTCACAAACCTTCTCCATATTTGATATCTAAACTGAGAAAATATGAAGAACTTCATAGAAAATGTGGACCTAACACTAGAGCTTACAATAAAGACATGAAAATTATTGCAAACTCTAAGGAAAACAATACAATTTCTTCTGCAACAACTTGCAAATACATTATTTGGTTACCTAGCAGGGGTGGTTTAGGTAACCAAATAATTAGCATGGCTTCATCATTTCTTTACGCACTCCTAACGAATCGTGTTTTGATTGTACAATTTGGAAAAGACAAAGAAGGTTTATTTTGCGAACCTTTTATAAATTCAACATGGCTACTATCGAAGAATTCCCACTTTTGGTATGCGCGAAATGTTGTAAAATATCAAGGCATAACTGAGATGGAAATGACTAATAAATTATATGAATATTTGCCATCAGCTATGCATGTGAATCTAGGATACAGTCCTAAACAGGATGAGAGATTTTTTCACTGTGACCATAGTCAATTTCTTCTCAGTAAAATACCTCTGGTGTTTTTGAATGCAAATCAATATTTTGTACCTTCATTTTTCATGACACCAATTTTCGAAGAAGAGTTAAGCAAAATGTTTCCAGAAATTACCTCAATTTTTCACCATTTGGGACGCTATTTATTTCACCCTGCAAATGAAGCATGGGAACTAATTACTAGTTTCTATCAACAACACCTTGGTAAAGCAAATGAGAGAATTGGGCTTCAAGTAAGAGTGTTTAATCCTAATTCAACATCACACCAAGTTGTTATGAATCAAATTTTGAATTGCACATTAGAGAATAAGTTACTTCCAAAAGTTAATGGTACAATAAATATGTCGGTATCATCGACTGACAAAAACAAGATGATTAAAAAGGTTGTTCTTGTGACATCTTTATATCCACAATATGGAAAGAATCTAAAGAAGATGTATCAGAATAAATCAACGGTTACCGGAGAAGTAATCGAGGTTTATCAACCAAGTAGTGAAAATCAACAAAAAATTGGTGATAAGAAGCAAAATTTGAAGGCTTGGGTTGAAATGTATTTACTAAGTTTATCTGATGTGTTGGTGACTACACATCAATCAACTTTTGGTTATGTTGCTAAGGCTTTGGGGAATTCAATACCATGGATTTTTTACAATCCGGTTTATAATCAAACTAAGGAGATTTGTGAACGTAAGTTTACATATGAGCCATGTAATGAAAATAAGGAGATTTGTGAACGTGAGTTTACATTAGAACCTTGTTATCATTATCCTCCTTTACATTATTGTGATGGAAAGGTTATTGAAGATGTTGCTTCTTCTTTTCATAATATTAGACATTGTAAGGATTTTCCTTTTGGTTTGAAGCTCGTTAACAGTTCTATTTAG 1797 0.3328 MEAYSTRLKVSFIASLVALSIFTMVTLMNQNSSFGLIKGFSKDMAMGEKAHKNVIIGGPNVATNEFGLKSNVTFDNFGGRNKSDFNIKSSKNIPLANSTSTPSKEITDDEKDKLLEGLLVSGFDEASCISRSQSHLYHKPSPHKPSPYLISKLRKYEELHRKCGPNTRAYNKDMKIIANSKENNTISSATTCKYIIWLPSRGGLGNQIISMASSFLYALLTNRVLIVQFGKDKEGLFCEPFINSTWLLSKNSHFWYARNVVKYQGITEMEMTNKLYEYLPSAMHVNLGYSPKQDERFFHCDHSQFLLSKIPLVFLNANQYFVPSFFMTPIFEEELSKMFPEITSIFHHLGRYLFHPANEAWELITSFYQQHLGKANERIGLQVRVFNPNSTSHQVVMNQILNCTLENKLLPKVNGTINMSVSSTDKNKMIKKVVLVTSLYPQYGKNLKKMYQNKSTVTGEVIEVYQPSSENQQKIGDKKQNLKAWVEMYLLSLSDVLVTTHQSTFGYVAKALGNSIPWIFYNPVYNQTKEICERKFTYEPCNENKEICEREFTLEPCYHYPPLHYCDGKVIEDVASSFHNIRHCKDFPFGLKLVNSSI 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03901 598 Pfam Xyloglucan fucosyltransferase 101 543 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre3g03901 598 FunFam Galactoside 2-alpha-L-fucosyltransferase 190 242 - -
Trre3g03901 598 PANTHER FUCOSYLTRANSFERASE 2-RELATED 34 595 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre3g03901 598 Gene3D - 189 295 - -
Trre3g03901 598 Gene3D - 362 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03901 Trre-Chr3 50067701 50070329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03901 106 594 Xyloglucan Fucosyltransferase1 AT2G03220 44.000 2.68e-141 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03901 K13681 - gmx:100809919 595.119