Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02193 ATGAATGGAGTTTCAATGGAAGAGAGAAAGGAAATAGTTGGAAGATTGAAATCTGTGTCAAGTTGGAAAGTCTGTGCCCAAAACGGCGAACGAAGCATACTTCACACCACCGCCCGCAGCGCCGTCGTCTCCGCTCCCTCAACATCCACCGCACCTAACCCTTTCGACAGTACTCCCTGCTTCCTCACCACCTACAGTCCAGTCACACGTTCATCTCTCCGCCGCTTTCAACACTACAGGCACGGTGGTGCTGGAATCCTACGTTTACCGGAAAACATCAACGGTGAGAAATTGTTCAAATCAAACCCTAACATTATGAAGAAGCGTCAAAATGCTCCTCTTACTATTGCTTCTAACTTGAAAAGGAAAGAAGATAAAGGTAAGAAAAATAAGAAAGAAGGTCGAAGGAAGGAGAAAGAAACAGAGATAAAAGTTGATATCATTAAACCTGAGAGTTCGCTGGAGGATGACCATGACGAAGAAGAGTTTGACGATGATTCTCCTAGAAGCAATATTGTGGGAAGCTTGCAGCAAGATCCTGATGACAATGATTCTGGATCAATAGATGGTTCTGAGACTGAAGAGGACACTGAGTTTTCTCATTCAGATGAAGAGGATATTAGGACAAATGGTGGAGCAAAATCTGAGGATTCAGTGGATTTAAGCTCTTTTGATTTACATTTGCAACATAATTTATCAAAAGAAGAAATTGACAACCTAAAGGGCTTGAAATTCAGCTGGGATGTACCAGTTATTGGTGTCTCAAATTGCAAGTGGACAGGAACTGGAGAAAATATCTTGAAGGATTTTAACATCAACTCCTATCCTGGTCTGAAGGAAAAGTTATATGAGCATTGGATGGATGTCTCCAAAACATCTGGAGGCAAGGATATTAATTCACCAAAACAGCAGATGTTTTTCTCCCTTTGCAGCAGCTACCGGGATATACTTCATTGTAACAAGAGACCATTCTATCTAAAAGGCCTTGAAGACACAAGCATCATGGATGCATACATAATGCATTCTCTCAATCACGTCTTTAAAACTAGAGATTGTGTTAAAAAGAATGATGCCAAACTGGCTAAGCTTGAAGAGGGTGCAGATAGTGAGAGATTCCGAGATCAAGGTTTTACTCGTCCTAAGGTTTTAATTTTGTTGCCATTGGCAAGTATTGCGTACCGTGTTGTAAAGAGGCTTATACAACTTACACCTTCAGCTTACAAGGTCAATGTTGAACATATGGATCGTTTTTCTGATAAATTTGGAGGTGAAGAACATAAGGGTGACAAGGATGACCAGGAGGCTGAAAATGCATACCCTCAGAAGTCATCTAAACCGGATGACTTTGAACTACTTTTTGGAGGCAATAATGAGGACGACTTTATGATTGGGATAAAATTTACTAGAAAGGCCATCAAGTTGTTCAGTGATTTCCATACCTCAGACTTTATTATTGCTTCGCCACTTTGTTTGTCTAATAAAATTGAAGAGGTTGGAAGCAATACGGAAAAAGATTTAGATTTTCTTTCATCCATAGAGGTTCTGATTATTGATCATGCAGATGTAATAGCAATGCAGAACTGGGATCATGTGCATACAGTTATTGAACACTTGAACCGGCTACCGTCTAAGCAGCCCAGAACAGATGTTATGCGCATTAGACCATGGTATCTCGATGAGCAAGCCAGATTTTATAGGCAAACTATAATTCTAGGTTTTTATTCGAATCCAGATATAAACGCTTCATTCAATCATCAATGTTCTAATTATGAAGGGAAGGTGAAGCTGTTGTGTGAATATAAAGGTATTATACACAAAGTGCTCCCTAAAATTCAACAGGTTTATGTACGGTTTAATATAGACTCAATAGTAGAGGCTGATGATAACCGTTTTGATTATTTTGTGAAGAAGGTTTTCCCAAGAATAAAAGATTCTGATCAGGGAGGGATCATGATATTTGCCAGCTCTTACTTTGAATTTATTCGAATCCGAAATTTTTTGAAGTCCCAAAATGCTTCCTTCTGTCTGCTTGGGGAGTATACAACTCAAAAGGATATTTCTCGTGCACGTCTTTGGTTTTTTGAAGGGAAAAGAAAAATTATGCTTTACACAGAGAGATCTCATTTTTACCACAGATATAAGATTCGCGGGGTTAAGAATTTAATCATGTATTCTCTCCCAGAGCGGAAGGAGCTTTACCCAGAGATTGTTAATGCACTTGATGCGTCTGGGTCTGAAAACATGCCATCCACCGTCCTTTTTTCGCGCCTCGACAAGTTTCGGTTGGAAAGAATAGTTGGAACTACTCCGGCGAAAACCATGGTGACTTCGGAGAAACCTGTTTTTGTTTTTTGCGAATAG 2361 0.3977 MNGVSMEERKEIVGRLKSVSSWKVCAQNGERSILHTTARSAVVSAPSTSTAPNPFDSTPCFLTTYSPVTRSSLRRFQHYRHGGAGILRLPENINGEKLFKSNPNIMKKRQNAPLTIASNLKRKEDKGKKNKKEGRRKEKETEIKVDIIKPESSLEDDHDEEEFDDDSPRSNIVGSLQQDPDDNDSGSIDGSETEEDTEFSHSDEEDIRTNGGAKSEDSVDLSSFDLHLQHNLSKEEIDNLKGLKFSWDVPVIGVSNCKWTGTGENILKDFNINSYPGLKEKLYEHWMDVSKTSGGKDINSPKQQMFFSLCSSYRDILHCNKRPFYLKGLEDTSIMDAYIMHSLNHVFKTRDCVKKNDAKLAKLEEGADSERFRDQGFTRPKVLILLPLASIAYRVVKRLIQLTPSAYKVNVEHMDRFSDKFGGEEHKGDKDDQEAENAYPQKSSKPDDFELLFGGNNEDDFMIGIKFTRKAIKLFSDFHTSDFIIASPLCLSNKIEEVGSNTEKDLDFLSSIEVLIIDHADVIAMQNWDHVHTVIEHLNRLPSKQPRTDVMRIRPWYLDEQARFYRQTIILGFYSNPDINASFNHQCSNYEGKVKLLCEYKGIIHKVLPKIQQVYVRFNIDSIVEADDNRFDYFVKKVFPRIKDSDQGGIMIFASSYFEFIRIRNFLKSQNASFCLLGEYTTQKDISRARLWFFEGKRKIMLYTERSHFYHRYKIRGVKNLIMYSLPERKELYPEIVNALDASGSENMPSTVLFSRLDKFRLERIVGTTPAKTMVTSEKPVFVFCE 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02193 786 MobiDBLite consensus disorder prediction 420 443 - -
Trre3g02193 786 MobiDBLite consensus disorder prediction 101 218 - -
Trre3g02193 786 PANTHER ORF PROTEIN-RELATED 109 785 IPR010678 GO:0005730|GO:0006364|GO:0034511
Trre3g02193 786 MobiDBLite consensus disorder prediction 170 184 - -
Trre3g02193 786 MobiDBLite consensus disorder prediction 134 154 - -
Trre3g02193 786 Gene3D - 337 554 IPR027417 -
Trre3g02193 786 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 380 704 IPR027417 -
Trre3g02193 786 MobiDBLite consensus disorder prediction 420 446 - -
Trre3g02193 786 Pfam Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 301 784 IPR010678 GO:0005730|GO:0006364|GO:0034511
Trre3g02193 786 MobiDBLite consensus disorder prediction 185 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02193 Trre-Chr3 19699001 19712483 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02193 3 19699001 19712483 Trre3g02193 3 19699001 19712483 ECH