LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre3g02086	ATGGATTCACCATTGGAGATTGATAAAGAGAATGAGAACAAAGGTAGTATGTGGGATTTGGAACAGAAAATTGATCAACCAATGGATGAAGAAGCAGGAAAACTCAGAAATATGTACAGAGAAAAAAAATTTTCTGCGCTTTTGCTTATGCGGCTTGCATATCAAAGTCTCGGTGTAGTTTATGGAGATTTAGGAACTTCGCCTTTGTACGTTTTCTATAACACGTTTCCTCATGGAGTCGATAATTCGGAGGATGTGATTGGAGCTCTTTCTTTGATCATATATTCTCTCACTCTCGTGCCACTGCTCAAATATGTTTTTATCGTATTAAGAGCAAATGATAATGGTCAAGGTGGAACATTCGCTCTTTATTCCTTGCTATGCCGACATGCGAATATAAAAATCATACCCAACCAGCACCGTACAGATGAAGAGTTGACGACGTATAGCCGAACTACCTTCCACGAGAAGTCATTTGCGGCAAAAACTCAAAGATGGTTAGAGGGACAAGCATTTATTAAATGTACCATTCTTATTCTTGTGCTTGTCGGTACCTGCATGGTGATTGGCGATGGTATTCTTACACCAGCTATATCTGTTTTATCTGCTGCTGGTGGCATCAAGGTGAATCGCCCGGAAATGGATAGCGGCGTGGTTGTGCTTGTTGCGGTTGTAATATTAGTTGGACTATTCAGCATGCAACATTACGGTACAGATAAAGTTGCGTGGCTCTTTGCTCCAATTATTCTGCTTTGGCTTCTCTTAATTGGAGGTATAGGTATCTACAACCTCTCGAGATTTGGTGGCAGTGTCCTAAAAGCCTTTTCACCTCTCTACGTGTATCGATATCTAAGAAACGGACACAAAAAAAGTTGGCTTTCCCTTGGTGGAATCTTGCTCAGCATAACAGGGACAGAAGCTCTCTTTGCCGATTTAGCCAATTTTCCTGTCTCATCCGTACAAATTGCGTTTACTCTTGTTGTGTTTCCTTGCCTTCTTTTGGCATATTCCGGACAAGCTGCTTATCTGGTGAATAACTTGCATCATTCACAAGATGTTTTTTATCGTTGTATTCCAGATAAAATATACTGGCCAGTATTTATTATTGCAACCCTAGCAGCAATAGTTGCAAGTCAAGCCACAATAACCGCAACCTTTTCAATCATTAAGCAAGCCCTTGCTCATGGATGTTTCCCAAGAGTCAAAGTCGTACATACATCGAAAAAGTACCTTGGTCAGATATATATTCCGGATATCAATTGGATCCTTATGGTTCTTTGCATTGCTGTCACTGCCGGCTTTAAAAATCAAAGTCAAATTGGAAATGCTTATGGCACTGCGGTTGTGTTAGTCATGCTGGTTACAACATTGCTGATGATCTTGGTCATGATATTAGTTTGGCATTGTCATTGGATTCTTGTCGTTATATTCACCGGCTTATCATTGATTGTCGAATGCACATACTTCTCTGCTGTACTTTTCAAAGTCGATCAAGGTGGATGGGCCCCCCTTGCAATTGCCGGAATATTTTTGATTGTAATGTATGTTTGGCATTACGGTACAGTGAAGCGCTATGAGTTTGAATTGCATAGCAAAGTCTCAATGGCATGGATTCTCGGTCTCGGTCCTAGTTTAGGACTAGTTCGTGTCCCCGGAATTGGCTTAGTCTATACAGAGCTTGCAAGTGGAGTTCCGCACATATTTTCTCATTTCATTACAAACCTACCAGCACTCCATTCGGTTGTTGTTTTCGTGTGTGTGAAATATCTTCCTGTCTACACCGTCCCGGAAGAAGAACGGTTCCTTGTCAAGCGTATCGGACCAAAGAATTACCACATTTTTCGGTGCGTGGCGCGATATGGATATAAAGACCTACATAAAAAAGACGATGATTTCGAGAAGAAACTCTTCCATAGCCTTTTCATGTTTGTTCGACTCGAGTCAATGATGGAAGGTTGCTCAGATTCAGAGTACAGCTTATGTGAACCGCAAACCGAACAATCAAGAGAATTCATGTTAAATAACAACGGAAACACAACTTCTATGAGTAATGTGGATTTTTCAATTTCATCGGTAGATTCGATAGTTCCAGCAAGATCACCATCACATGTGAATGTTGTCACATTTCAATCTTCAAGCCACTGTACCGAGGTCGATGAACTTGAATTCTTAAACAGTTGTAGAGAAGCTGGTGTTGTTCATATTCTTGGAAACACAATTGTGAGGGCTAGTAGGGATTCAAGATTCTACAAGAAAATAGCTGTTGATTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGTCATCTTCAATATTCCTCATGAGAGTCTCTTAAATGTTGGTCAAGTTTTCTATGTATAG	2370	0.4025	MDSPLEIDKENENKGSMWDLEQKIDQPMDEEAGKLRNMYREKKFSALLLMRLAYQSLGVVYGDLGTSPLYVFYNTFPHGVDNSEDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTFALYSLLCRHANIKIIPNQHRTDEELTTYSRTTFHEKSFAAKTQRWLEGQAFIKCTILILVLVGTCMVIGDGILTPAISVLSAAGGIKVNRPEMDSGVVVLVAVVILVGLFSMQHYGTDKVAWLFAPIILLWLLLIGGIGIYNLSRFGGSVLKAFSPLYVYRYLRNGHKKSWLSLGGILLSITGTEALFADLANFPVSSVQIAFTLVVFPCLLLAYSGQAAYLVNNLHHSQDVFYRCIPDKIYWPVFIIATLAAIVASQATITATFSIIKQALAHGCFPRVKVVHTSKKYLGQIYIPDINWILMVLCIAVTAGFKNQSQIGNAYGTAVVLVMLVTTLLMILVMILVWHCHWILVVIFTGLSLIVECTYFSAVLFKVDQGGWAPLAIAGIFLIVMYVWHYGTVKRYEFELHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPALHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNYHIFRCVARYGYKDLHKKDDDFEKKLFHSLFMFVRLESMMEGCSDSEYSLCEPQTEQSREFMLNNNGNTTSMSNVDFSISSVDSIVPARSPSHVNVVTFQSSSHCTEVDELEFLNSCREAGVVHILGNTIVRASRDSRFYKKIAVDYIYAFLRKICRENSVIFNIPHESLLNVGQVFYV	789

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre3g02086	789	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	39	787	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Trre3g02086	789	NCBIfam	potassium uptake protein	52	789	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Trre3g02086	789	Pfam	K+ potassium transporter	54	624	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre3g02086	Trre-Chr3	18441206	18445200	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Trre3g02086	3	18441206	18445200	Trre3g02086	3	18441206	18445200	ECH