Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02083 ATGTACTCATCAATTTCATCATCATCATCAAGAGGAGGGTATGGTGGTGATGGTGGAGACATGAACATGAACATGAACATAGACATGGGTATGATGAATATGAAACCTGCATGGCTAGAGAGGTTGATGGGTGAAACATTCTTTGGTGATTGTGGGGTCCACAAAAATCAAAGGAAGAACGAGAAGAACATTTTTTGCTTACACTGTTGTCTTAGCATCTGCCCCCACTGTTTACCTTCTCATACCTCTCATCCTCTTCTCCAGGTGAGAAGATATGTTTACCACAATGTAATTCGATTGGATGATCTGGAAAAGCTCATTGATTGTTCCAATATTCAGCCCTATACTATTAACAGTGCCAAAGTGATATTTTTAAATCAAAGGCCACAATCAAGGTCATGCAAAGGTACAACCAATGCTTGCTTCACTTGTGACAGGATTCTTCAGGACCCATTCCATTTTTGTTCTCTCTCATGCAAGGTAGATTTCATGGTGTACCAAGGTCAAAGTTTGTCCAACATTTTACATCGATTTGATGAATCTGACTTTGCAATATCACAATTCGAGGGACTAAGAGTGGATGGATCTGAGGTAATTGATGAAGATAACAATCTCAACCACATTGGCCCAAGTTCTTCTAATTACTCCATTAATGCCCATGATCAAGATCATGTCATCACTAGCACCAAGAAGAAGAACAAATCCAATAGATTTCTCCCTGGCATTGTCCTTTCTCTTGGAAGTAGAAGAAAAGGTGCTCCTCAAAGGGCCCCTCTTTTATAA 783 0.3985 MYSSISSSSSRGGYGGDGGDMNMNMNIDMGMMNMKPAWLERLMGETFFGDCGVHKNQRKNEKNIFCLHCCLSICPHCLPSHTSHPLLQVRRYVYHNVIRLDDLEKLIDCSNIQPYTINSAKVIFLNQRPQSRSCKGTTNACFTCDRILQDPFHFCSLSCKVDFMVYQGQSLSNILHRFDESDFAISQFEGLRVDGSEVIDEDNNLNHIGPSSSNYSINAHDQDHVITSTKKKNKSNRFLPGIVLSLGSRRKGAPQRAPLL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02083 260 Pfam PLATZ transcription factor 90 161 IPR006734 -
Trre3g02083 260 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 33 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02083 Trre-Chr3 18396404 18403607 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre3g02083 PLATZ 8.1e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02083 3 18396404 18403607 Trre3g02083 3 18396404 18403607 ECH