Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02054 ATGAAAAAAACTATTAAGCATAATGTGGATATTCCCTTGTCCCAACCACCCTCTCCTTCTCCATTACCATCTTCATCTTCATACACAAAATGGAGTGGGAGAGTGGTGTACCCAATAGAGTATGGTGCAGACCCAACAGGGGAAAATGAAAGCAGTGATGCCATTATGAAAGCTATAGAAGATGCATTCAAGATGGATAATAGAGGACTTGAATTGTTGCCAGGAATTAGAGACCTTGGTTGTGTTGTCATTGATTTTCAAGGTGGAAACTATAAAATAAGCAAACCTATCACATTTCCTTCCTCTGTTGGTAATCTTGTGGTAATAGGAGGAACCTTGAGAGCTTCTGATACATTTCCAACTAATAGACACCTTGTTGAATTGTGTGCATCAAATTCCAAAATGCCCCAAAATGCAACCAACAACAAATTACTTCAACAAACAATAGGAATTTACTATGAAGACATAACATTTAGAGACATCCTCTTCGATTCGAGTTACCAATGCGGAGGCATATTCATCGTCGATTCGGCTAGAATCAGAATCAACAATTGTTTCTTCCTTCATTTCGCCACCGAAGGAATTAAAGTACAAAGTGGCCATGAAACCTTCATATCAAACTGTTTTCTTGGACAACACTCAACAGTCGGCGGAGACAAAGGCGAAAGACAATTTTCAGGAACCGCAATTGATCTTTCTAGCAACGATAATGCAATCACCGATGTCGCGATTTTCTCCGCAGCTATTGGAATTCTTGTTAGAGGACAAGCTAACATGATCACAGGTGTGCATTGTTATAACAAAGCAACAGGATTTGGAGGAATTGGTATTTTGTTGAAATTAGCAGGAAATTCACAAACTAGAATTGATAATTGTTACATGGATTATAATTCTATAGTTATGGAAGATCCTGTTCAAGTTCATGTTACCAATGGATTTTTCTTAGGTGATGCTAATATTGTTTTGAAGTCAATTAAAGGGAAAGTTTATGGTTTAAATATTATTAACAATATGTTTAGTGGAAATCCTAATAATAAAGTTCCAATAGTGACATTAGATGGTAAATTTAGTAACATTGATCAAGTGGTGATTGATAGGAACAATGTGATTGGTATGAGATTGAGATCAACAATTGGGAAGTTGAATGTGGATTATAATGGCACAAAATGGGTGGCAGATTTTTCAAATGTTTTGGTGTTTCCAAATAGAATTAATAATTTTCAGTATTCATTTTATATATTAGAGGGACCAAAGTTTGTTGCACATTTAGTAAGTAATGTGTCAAATAATGTTGTAATTGTGGAAAGTGAGAAACCAGTTCATGGTGTTGTTTCTTTCTTTGTTGAACAATGA 1353 0.3548 MKKTIKHNVDIPLSQPPSPSPLPSSSSYTKWSGRVVYPIEYGADPTGENESSDAIMKAIEDAFKMDNRGLELLPGIRDLGCVVIDFQGGNYKISKPITFPSSVGNLVVIGGTLRASDTFPTNRHLVELCASNSKMPQNATNNKLLQQTIGIYYEDITFRDILFDSSYQCGGIFIVDSARIRINNCFFLHFATEGIKVQSGHETFISNCFLGQHSTVGGDKGERQFSGTAIDLSSNDNAITDVAIFSAAIGILVRGQANMITGVHCYNKATGFGGIGILLKLAGNSQTRIDNCYMDYNSIVMEDPVQVHVTNGFFLGDANIVLKSIKGKVYGLNIINNMFSGNPNNKVPIVTLDGKFSNIDQVVIDRNNVIGMRLRSTIGKLNVDYNGTKWVADFSNVLVFPNRINNFQYSFYILEGPKFVAHLVSNVSNNVVIVESEKPVHGVVSFFVEQ 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02054 450 SUPERFAMILY Pectin lyase-like 85 432 IPR011050 -
Trre3g02054 450 FunFam Polygalacturonase QRT3 38 445 - -
Trre3g02054 450 MobiDBLite consensus disorder prediction 1 28 - -
Trre3g02054 450 SUPERFAMILY Pectin lyase-like 28 211 IPR011050 -
Trre3g02054 450 Gene3D - 39 439 IPR012334 -
Trre3g02054 450 PANTHER POLYGALACTURONASE QRT3 5 450 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02054 Trre-Chr3 18195460 18198429 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02054 3 18195460 18198429 Trre3g02054 3 18195460 18198429 ECH