Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02053 ATGATATTCTCAACCTTAGCCCTTCTCTTATCACTATTGGTGATACTACAAGTACAAGAAACCACTTCCTTCAATGAACACATAAAACTTTCTCATTTCATGAAAAAAACTATTAAGCATAATGTGGATATTCCCTTGTCCCAACCACCCTCTCCTTCTCCATTACCATCTTCATCTTCATACACAAAATGGAGTGGGAGAGTGGTGTACCCAATAGAGTATGGTGCAGACCCAACAGGGGAAAATGAAAGCAGTGATGCCATTATGAAAGCTATAGAAGATGCATTCAAGATGGATAATAGAGGACTTGAATTGTTGCCAGGAATTAGAGACCTTGGTTGTGTTGTCATTGATTTTCAAGGTGGAAACTATAAAATAAGCAAACCTATCACATTTCCTTCCTCTGTTGGTAATCTTGTGGTAATAGGAGGAACCTTGAGAGCTTCTGATACATTTCCAACTAATAGACACCTTGTTGAATTGTGTGCATCAAATTCCAAAATGCCCCAAAATGCAACCAACAACAAATTACTTCAACAAACAATAGGAATTTACTATGAAGACATAACATTTAGAGACATCCTCTTCGATTCGAGTTACCAATGCGGAGGCATATTCATCGTCGATTCGGCTAGAATCAGAATCAACAATTGTTTCTTCCTTCATTTCGCCACCGAAGGAATTAAAGTACAAAGTGGCCATGAAACCTTCATATCAAACTGTTTTCTTGGACAACACTCAACAGTCGGCGGAGACAAAGGCGAAAGACAATTTTCAGGAACCGCAATTGATCTTTCTAGCAACGATAATGCAATCACCGATGTCGCGATTTTCTCCGCAGCTATTGGAATTCTTGTTAGAGGACAAGCTAACATGATCACAGGTGTGCATTGTTATAACAAAGCAACAGGATTTGGAGGAATTGGTATTTTGTTGAAATTAGCAGGAAATTCACAAACTAGAATTGATAATTGTTACATGGATTATAATTCTATAGTTATGGAAGATCCTGTTCAAGTTCATGTTACCAATGGATTTTTCTTAGGTGATGCTAATATTGTTTTGAAGTCAATTAAAGGGAAAGTTTATGGTTTAAATATTATTAACAATATGTTTAGTGGAAATCCTAATAATAAAGTTCCAATAGTGACATTAGATGGTAAATTTAGTAACATTGATCAAGTGGTGATTGATAGGAACAATGTGATTGGTATGAGATTGAGATCAACAATTGGGAAGTTGAATGTGGATTATAATGGCACAAAATGGGTGGCAGATTTTTCAAATGTTTTGGTGTTTCCAAATAGAATTAATAATTTTCAGTATTCATTTTATATATTAGAGGGACCAAAGTTTGTTGCACATTTAGTAAGTAATGTGTCAAATAATGTTGTAATTGTGGAAAGTGAGAAACCAGTTCATGGTGTTGTTTCTTTCTTTGTTGAACAATGA 1452 0.354 MIFSTLALLLSLLVILQVQETTSFNEHIKLSHFMKKTIKHNVDIPLSQPPSPSPLPSSSSYTKWSGRVVYPIEYGADPTGENESSDAIMKAIEDAFKMDNRGLELLPGIRDLGCVVIDFQGGNYKISKPITFPSSVGNLVVIGGTLRASDTFPTNRHLVELCASNSKMPQNATNNKLLQQTIGIYYEDITFRDILFDSSYQCGGIFIVDSARIRINNCFFLHFATEGIKVQSGHETFISNCFLGQHSTVGGDKGERQFSGTAIDLSSNDNAITDVAIFSAAIGILVRGQANMITGVHCYNKATGFGGIGILLKLAGNSQTRIDNCYMDYNSIVMEDPVQVHVTNGFFLGDANIVLKSIKGKVYGLNIINNMFSGNPNNKVPIVTLDGKFSNIDQVVIDRNNVIGMRLRSTIGKLNVDYNGTKWVADFSNVLVFPNRINNFQYSFYILEGPKFVAHLVSNVSNNVVIVESEKPVHGVVSFFVEQ 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02053 483 Gene3D - 72 472 IPR012334 -
Trre3g02053 483 SUPERFAMILY Pectin lyase-like 61 464 IPR011050 -
Trre3g02053 483 FunFam Polygalacturonase QRT3 71 478 - -
Trre3g02053 483 PANTHER POLYGALACTURONASE QRT3 13 483 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02053 Trre-Chr3 18195361 18198429 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02053 3 18195361 18198429 Trre3g02053 3 18195361 18198429 ECH