Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02046 ATGTTTCATTCTTTCATCTTCTTCTTCTATCTCTTCATCTCAACTCCTTCACGTGCTTCTTTGTTTTCTGGAATTGAAACTGGAGATTTAGAAAAAAGGGGTGATTTGTTTCCGCAGATTCTAAGAGACGAGGCAGTGGAATGGCTTGTTGAGCTTGGAAAGGTCAGTGATGCTAGTGAATATCTTGAGAGGACATTTTTGAGTCCTGCATCCGCAAGGGCAATTGATCTTATCCGAAAATGGATGGAAGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAATGTACATGGAAGAGTCGAGGGTGCAAATGCAAATACCGAAGCTTTATTGATCGGATCTCACATGGATACTGTTATTGATGCTGGTAAATTTGACGGAGCGCTAGGAATAGTGTCTGCGATATCTGCTTTAAAGGTTATGCATGTCAACGGCAAGCTGCAAAATCTAAGGCGTCCTGTTGAGGTGATTGCATTTTGTGATGAAGAGGGTGTGAGATTTCAAACTACTTTCTTAGGTAGTGGTGCTATAGCTGGTATTTTATCTGCCGCAACATTGGAGGTACCTGATAAAAAGAATGTAACGATAAAAGATGTTCTGAAAGAGAACTCAATAGAAGCCACGGAGGAAAGTCTTTTGCGGCTCAAGTATGATCCAAAATCTGTTTGGGGTTATGTCGAGCTTCACATCGAGCAGGGTCCGGTGCTAGAACAAGTTGGTTTCCCACTTGGTGTGGTTAAAGGCATAGCTGGTCAGACACGATTGAAGGTTACGGTTAAAGGCTCGCAAGGTCATGCCGGAACAGTTCCAATGTCCATGCGCCAGGATCCTATGGTGGCTGCTGCTGAACAAATTGTACTTATGGAAAGCCTCTGCAAACATCCTGAAGAATACCTTTCTTCCGAGGGTCATTGCAGCGATTCATCAATAAAATCACTTTCAAGTTCACTTGTTTGTACTGTTGGTGAAATATCAACATGGCCGAGTGCTAGTAACGTCATTCCAGGGCAGGTTACATATACAGTGGATATACGAGCAATTGATGATTTTGGACGTGAGGCCGTTATCTATGATTTATCCAATCGAATTTATCAGATATGTGACAAGCGTTCCGTTTCATGCCTTATTGAACACAAGCATGATGCAGGTGCTGTGATTTGTGATTCTGAATTAAGTTCACAGCTGAAGTCTGCAGCTTATTCTGCACTCAAGAGAATGGAGGGTGACATTCAAGATGAAGTTCCGATATTAATGAGTGGAGCAGGGCATGATGCTATGGCAATGTCTCGCTTAACAAAGGTGGGAATGTTATTTGTGCGCTGTCGCGGAGGCATAAGTCACTCTCCACAAGAGGATGTACTAGACAACGATATATGGGCGGCCGGTTTAGCAACCTTATCATTTCTAGAAAATCTATAA 1422 0.4283 MFHSFIFFFYLFISTPSRASLFSGIETGDLEKRGDLFPQILRDEAVEWLVELGKVSDASEYLERTFLSPASARAIDLIRKWMEDAGLRTWVDQMGNVHGRVEGANANTEALLIGSHMDTVIDAGKFDGALGIVSAISALKVMHVNGKLQNLRRPVEVIAFCDEEGVRFQTTFLGSGAIAGILSAATLEVPDKKNVTIKDVLKENSIEATEESLLRLKYDPKSVWGYVELHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVKGSQGHAGTVPMSMRQDPMVAAAEQIVLMESLCKHPEEYLSSEGHCSDSSIKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDFGREAVIYDLSNRIYQICDKRSVSCLIEHKHDAGAVICDSELSSQLKSAAYSALKRMEGDIQDEVPILMSGAGHDAMAMSRLTKVGMLFVRCRGGISHSPQEDVLDNDIWAAGLATLSFLENL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02046 473 SUPERFAMILY Zn-dependent exopeptidases 37 473 - -
Trre3g02046 473 Gene3D Zn peptidases 55 463 - -
Trre3g02046 473 CDD M20_bAS 46 471 - -
Trre3g02046 473 PANTHER ALLANTOATE DEIMINASE-RELATED 24 471 IPR010158 GO:0016813
Trre3g02046 473 SUPERFAMILY Bacterial exopeptidase dimerisation domain 252 384 IPR036264 -
Trre3g02046 473 FunFam Allantoate deiminase 252 384 - -
Trre3g02046 473 Pfam Peptidase dimerisation domain 252 360 IPR011650 -
Trre3g02046 473 Pfam Peptidase family M20/M25/M40 112 462 IPR002933 GO:0016787
Trre3g02046 473 NCBIfam hydantoinase/carbamoylase family amidase 44 466 IPR010158 GO:0016813
Trre3g02046 473 Gene3D - 252 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02046 Trre-Chr3 18117968 18121849 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02046 3 18117968 18121849 Trre3g02046 3 18117968 18121849 ECH