Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04916 ATGTTAGCCTTTACTTTCTTCCTCCTCTTCTTCTCCGGTTTCTTCCACTTCCCTTCCGTTTCACCCTCTCTCCCACCCTTCCACGAATCCTTCACGCTCCCTTCTACAAATACCTCCTCTCAACCCTTCACCGATCTGGTTTCTTCCTTCAGGAAATGGGATTTGCAAGTGGGTTGTGCTAAATTCAGAGAAAAAACAAATGGGGTTTCTTTAAATCAGTCAAAGGTTGTTTCTTTACAAGAATTTGGTGGTGATTCTGAATGTAAGGGTTTTAAGCTTAATCATGTTAGTGTTTTGGTTAAAGGGTGGACTTGGATTCCTGATAATTTGGATAATTTGTATTCTTGTCGTTGTGGGTTGAGCTGTTTGTGGACCAAATCAAATGTTCTCGCTGATAAGCCTGATGCTTTGATGTTTGAAACTTCTACTCCTCCGATTCAGAGACGTGTGGGAGAACCACTTCGTGCGTATATGGATCTTGAAGCTGGCCGAAGGAGATCTGGTCGAGAGGATATATACATTAGTTACCATGCTGAAGATGATGTACAGTCAACCTATGCCGGTGCTCTGTTTCACAACGGACGAAACTATCATGTCTCCAATACTAAAAGCAGTGATATACTTGTTTATTGGTCTTCATCACGGTGTCTCTCTCAAAGGAATGAACTTGCCAAGAAACTTCTTGGCTTGCTGCCACATCATTCTTTTGGCAAGTGCCTCAACAATGTCGGTGGTCTAGATATGGCTCTTTCGTTCTTTCCTGAGTGTGAAAAAGATGCAAATGCTAAACCAAAATGGTGGGATCATCTACATTGTGCCATGTCTCACTATAAGTTTGTTCTTGCAATCGAGAACACTTTCACCGAGAGTTACGTGACAGAGAAGTTATATTACGCATTGGACTCGGGTGCAGTGCCTATCTATTTTGGTGCACCAAACGTCATGGATTTTGTTCCTCCACATTCAATAATAGATGGTAGAAAATTCAAATCAGTAGAAGAACTGGCTTCATACGTGAAGGCCGTAGCTAATGACCCAGTAGCCTATGCAGAATACCATGCATGGAGAAGGTGCGGTGTAATGGGTAACTATGCAAAAACACGAGCCGTTAGCCTCGACACATTGCCGTGCCGGTTATGTGAGGCTGTTAGCAGAAAAGGCGGAAGAAATGCAAGAAGCTAG 1182 0.4298 MLAFTFFLLFFSGFFHFPSVSPSLPPFHESFTLPSTNTSSQPFTDLVSSFRKWDLQVGCAKFREKTNGVSLNQSKVVSLQEFGGDSECKGFKLNHVSVLVKGWTWIPDNLDNLYSCRCGLSCLWTKSNVLADKPDALMFETSTPPIQRRVGEPLRAYMDLEAGRRRSGREDIYISYHAEDDVQSTYAGALFHNGRNYHVSNTKSSDILVYWSSSRCLSQRNELAKKLLGLLPHHSFGKCLNNVGGLDMALSFFPECEKDANAKPKWWDHLHCAMSHYKFVLAIENTFTESYVTEKLYYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFKSVEELASYVKAVANDPVAYAEYHAWRRCGVMGNYAKTRAVSLDTLPCRLCEAVSRKGGRNARS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04916 393 Gene3D - 153 363 IPR038577 -
Trre2g04916 393 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 85 385 - -
Trre2g04916 393 FunFam Alpha-(1,4)-fucosyltransferase 155 361 - -
Trre2g04916 393 PIRSF FucT_plant 1 393 IPR017177 -
Trre2g04916 393 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 91 385 IPR001503 GO:0006486|GO:0008417|GO:0016020
Trre2g04916 393 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 207 386 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04916 Trre-Chr2 56709281 56711981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04916 1 391 Xyloglucan Fucosyltransferase1 AT1G71990 68.622 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04916 K14412 - gmx:100791990 669.848