Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04515 ATGGTATGGTTGTGGTTTACTTCAAATGGGACAAAACTTTCATTGGTCATCTTTACCATAGTTTTCTCTCTACTCATATTAACACTCACTTTTGGTCATTTTGAGTGGTTTTCAATTATACTAAATGGAAGAGATCAAAATGTGACAGCACAAGATTTTTCATCAAGGAAAATCACATGTAATGGGTTGCAAACCAAGAATTTTACCGAGTCATATGTTGGTTCAAAAAACAGTTCATCGCCGTCAACAGAAAGTCATGCTGACAAACTCCTTGATGGGTTTCTCTCATCTGAATTTGATAAAGGATCATGCTTAAGCAGATTTCAAGCTTACTTATACCGCAAGGCATCACCTCATAAACCTTCTCCGTATCTCATATCAAAACTTCGTAGCTATGAAAATCTTCACAGAAGATGTGGACCTCATAGTAAAGCTTACAAGAGAACAATGGTAAAGCTCAAAAGATTCAAATCCAATAAATCCAATGTTACTGCCGGATCATGTAAGTACATAGTATGGACAGCTGCTAATGGCTTAGGGAACAGAATGGTGAGCATAGCTTCAACTTTCCTATATGCGATCCTTACCGATCGAGTCCTATTAGTAGAGTTTCATGATGACATGGTTGGCCTATTTTGTGAACCATTCCCCAATTCATCATGGATATTGCCTAAAGATTTTCCTTTTAGCGACAACAGAAAAGTTGAAATATATGAAATTATGCTAAAAAGGGACAAGGAAAAAACTTCAAAGTTACTATTACCATCGACTATAGGAGTACGTCTCAATATGTATCATTCAAGTAATGATCATGAACTTTTTTTCTCTTGTGATCATAACCAACATCTTCTACATAAAGTACCTCTCTTGATTGTAACATCGGATCAATATTTTGTACCTACTCTTTTTATGGTTCCATCTTTTAACCAAGAGCTTAACAAAATGTTCCCAAACAAAGATACGGTTTTTCACCATTTAGGACGTTACCTATTTCTCCCTTCAAACGATGTATGGGGACCGACCAAAAGATTCTACCAAGCATATTTAGCAAGGGCAGAAGTGAAGATTGGAATCCAAATAAGAGTATTCAATCCTGATCTCACACCGTATGAAACAATCATGGGTCAAGTTTTGAAATGCACGCAAAATCATACGATACTACCTGGTTTCGCCACGAATATTTCAAAAGACCCTCCATTGAAAAATCAGATTTTGAAGTCTGTTTTGGTAACATCATTATATCCACAGTATGGTGAGAATCTTAGGACAATGTATTTGAAAAAACCAACTGTTACAGGTGAAATTGTAGGAGTTTATCAGCCAAGTCATGAAGATCATCAAAAATTTGGTGATAACTTGCACAACAAGAAAGCATTGACAGACATATATCTATTAAGTTTGTGTGATGTTTTGGTAACTAGCTCATTATCAACTTTTGGGTATGTGGCTCAGGGTTTGGGAGGCATAAAGCCATTGATTCTTAAAAAATTACTAGACAGTGACATCCCGGATTCGCCTTGTGTGCAAGATTTCTCTATGGAGCCTTGTTTTCATATAACTCCTAAACTTGATTGCATGGAAAAACCTATAGATGATGTTGGCACAATGTTTCCTTACATGAAGAAATGTGTTGATTATAAAAGTGGTGTCAAGTTGGTCAATGATATTCAATAG 1674 0.3602 MVWLWFTSNGTKLSLVIFTIVFSLLILTLTFGHFEWFSIILNGRDQNVTAQDFSSRKITCNGLQTKNFTESYVGSKNSSSPSTESHADKLLDGFLSSEFDKGSCLSRFQAYLYRKASPHKPSPYLISKLRSYENLHRRCGPHSKAYKRTMVKLKRFKSNKSNVTAGSCKYIVWTAANGLGNRMVSIASTFLYAILTDRVLLVEFHDDMVGLFCEPFPNSSWILPKDFPFSDNRKVEIYEIMLKRDKEKTSKLLLPSTIGVRLNMYHSSNDHELFFSCDHNQHLLHKVPLLIVTSDQYFVPTLFMVPSFNQELNKMFPNKDTVFHHLGRYLFLPSNDVWGPTKRFYQAYLARAEVKIGIQIRVFNPDLTPYETIMGQVLKCTQNHTILPGFATNISKDPPLKNQILKSVLVTSLYPQYGENLRTMYLKKPTVTGEIVGVYQPSHEDHQKFGDNLHNKKALTDIYLLSLCDVLVTSSLSTFGYVAQGLGGIKPLILKKLLDSDIPDSPCVQDFSMEPCFHITPKLDCMEKPIDDVGTMFPYMKKCVDYKSGVKLVNDIQ 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04515 557 Pfam Xyloglucan fucosyltransferase 75 525 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre2g04515 557 Gene3D - 342 494 - -
Trre2g04515 557 PANTHER FUCOSYLTRANSFERASE 2-RELATED 22 554 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre2g04515 557 FunFam Galactoside 2-alpha-L-fucosyltransferase 166 217 - -
Trre2g04515 557 Gene3D - 165 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04515 Trre-Chr2 52546891 52548875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04515 67 553 Xyloglucan Fucosyltransferase1 AT2G03220 48.884 2.98e-163 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04515 K13681 - gmx:100809919 544.273