Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g04514 ATGGTATTGCAAGAGTTAACTTCAAATGGGACCAAACCTTCATTGGTCATCTTTGTCATAGCTTTGTCTCTACTCTTATTAACACTCACTTTTGGTCATTTTGAGTGGTTTTCAACTATACTAAATAGAAGAGATCAAAATGTCACAACAACAGATTTTTCATCAAGATGTAATGGGTTGCAAATCAAGAACTTTACAGAATCATATGTCGGTTCAAAAAACAGTTCATCAAAATCAACAGAAAGTCATGCTGACAAACTCCTTGATGGGCTTCTCTCTTCTGGATTTGATAAAGGATCATGCTTAAGCAGATTTCAAGCTTACTTATACCGCAAGGTATCGCCTCATAAACCTTCTCCGTATCTCATATCAAAACTTCGTAGCTATGAAGATCTTCACAGAAAATGTGGACCTCATAGTAAAGCTTACAAGAGAACCATGGTAAAGCTCAAAAGATTCAAATCCAATAAATCCAATGCTACTACTGGATCATGTAAGTACATAGTATGGACAGCTGCGAATGGATTAGGGAACAGAATGGTGAGCATGGCTTCAATTTTCCTATATGCGATCCTCACCGATCGAGTCCTACTAGTAGAGTTTCATGATGAAATGGTTGGCCTATTTTGTGAACCATTCCCTAATTCATCATGGATATTGCCTAAAGATTTTCCGTATAGTGACAACAGAAAAGTCGAACTATATGAAAGCATGCTAAAGAGGGACAAAGAAAACACTTCAAAGAAGTTACTATTACCATCGACTATAGGAATACGCCTCAATATGTATCATTCAATTAATGATCATGAACTTTATTTCTCTTGTGATCATAACCAACATCTTCTACATAAAGTACCTCTCTTGATTGTAACATCAGATCAGTATTTTGTACCAGCTCTTTTTATGGTTCCATCATTTAACCAAGAGCTTAACAAAATGTTCCCAAACAAAGACACAGCTTTTCACCATTTAGGACGTTACCTATTTCTCCCTTCAAATGATGTATGGGGACCGATCAAAAGATTCTATCAAGCATATTTAGCCAGGGCAGAAGAGAAGATTGGAATCCAAATAAGAGTGTTCAATCCTGAACTCACACCTTATGAAACAATCATGGGTCAAGTTTTGAAATGCACCCAAAATCATACTATACTACCTGGTTTTGCGACAAATTTTTCAAAAGACCCTCCATTGAAAAATCAGATTTTGAAATCTGTTTTGGTAACATCATTATATCCACAATATGGTGAGAATCTTAGGACTATGTATTTGAACAAACCAACTGCTACAGGTGAAATCATAGGAGTTTATCAGCCAAGTCATGAAGATCATCAAAAATTTTATGATAACTTGCACAACAAGAAAGCATTGACAGACATATATCTGTTAAGTTTGTGTGATGTTTTGGTAACTAGCTCAGTATCAACTTTTGGGTATGTGGCTCAGGGTTTGGGAGGCATAAAGCCATTGGTTCTTCACAAATTACTGGACAGCAACATCCCGGATTCGCCTTGTGTGCAAGATGTCTCTATGGAGCCTTGTTTTCATATAACTCCTAAACTTGATTGCATGGAAAAATCTATAGATGATGTTGGCACAATTTTTCCTTACATGAAGAGATGTGTTGATTATCAATGGGGTGTCAAGTTGGTCAATCATATTCTATAG 1668 0.3633 MVLQELTSNGTKPSLVIFVIALSLLLLTLTFGHFEWFSTILNRRDQNVTTTDFSSRCNGLQIKNFTESYVGSKNSSSKSTESHADKLLDGLLSSGFDKGSCLSRFQAYLYRKVSPHKPSPYLISKLRSYEDLHRKCGPHSKAYKRTMVKLKRFKSNKSNATTGSCKYIVWTAANGLGNRMVSMASIFLYAILTDRVLLVEFHDEMVGLFCEPFPNSSWILPKDFPYSDNRKVELYESMLKRDKENTSKKLLLPSTIGIRLNMYHSINDHELYFSCDHNQHLLHKVPLLIVTSDQYFVPALFMVPSFNQELNKMFPNKDTAFHHLGRYLFLPSNDVWGPIKRFYQAYLARAEEKIGIQIRVFNPELTPYETIMGQVLKCTQNHTILPGFATNFSKDPPLKNQILKSVLVTSLYPQYGENLRTMYLNKPTATGEIIGVYQPSHEDHQKFYDNLHNKKALTDIYLLSLCDVLVTSSVSTFGYVAQGLGGIKPLVLHKLLDSNIPDSPCVQDVSMEPCFHITPKLDCMEKSIDDVGTIFPYMKRCVDYQWGVKLVNHIL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g04514 555 Pfam Xyloglucan fucosyltransferase 75 523 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre2g04514 555 Gene3D - 411 493 - -
Trre2g04514 555 PANTHER FUCOSYLTRANSFERASE 2-RELATED 23 552 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre2g04514 555 FunFam Galactoside 2-alpha-L-fucosyltransferase 163 214 - -
Trre2g04514 555 Gene3D - 162 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g04514 Trre-Chr2 52543231 52545242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g04514 61 551 Xyloglucan Fucosyltransferase1 AT2G03220 48.692 5.89e-168 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g04514 K13681 - gmx:100809919 549.666