Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06066 ATGGCAAGCCACGGCTCATCATTTTCGAGCCTCCGAACCTATCTCCAAGCCGTCGCACAAACTCCTTCTCGCTTCGCTCGTCGTGGCTTCTCCGTCTCAACTTCATATGAAGAAATGAGCCGCGTTCGAGCCAGGTCCGGTACCAGCATGCGGAAAACTCTCCGCTGGTTCGACCTTGTTGGCTTTGGTATCGGTGGAATGGTCGGCGCCGGAGTTTTCGTCACCACCGGTCACGCCAGTCGCGTTTTCGCCGGTCCTGCTGTTGTTCTATCTTACGCCATTGCTGGTTTCTGCGCTCTCTTATCAGCTTTCTGTTACACTGAATTCGCCGTTGATATGCCTGTCGCCGGCGGTGCTTTTAGCTACCTTCGCGTCACCTTCGGTGAATTTGCGGCGTTTATAACCGGAGCAAATCTGATCATGGATTACGTGATGTCCAATGCCGCCGTGGCTAGAGGTTTTACGGCGTATTTCGGCACCACAATCGGTATCTCCTCCGATAAATGGAGGATCACGGTTCCTTCATTTCCTCAAGGATTTAATCAAATAGACATGGTCGCTGTTGTAGTCGTTTTACTCATCACCATCGTTATCTGTTACAGTACGAGGGAAAGTTCAGTGGTGAATATGATTTTGACGGCGTTGCACATATTATTCATAGCATTTGTGATAGTGATAGGTTTTTGGAAAGGTAGTTGGAAGAATTTTACACACTCGGCGAATTCGGAGAATCCTTCGGGTTTTTTTCCTCATGGTGCTGCCGGTGTGTTTAACGGTGCAGCAGCGGTTTATTTAAGCTATATTGGTTATGATGCTGTTTCAACAATGGCGGAAGAAGTAAAGGAACCTGTTAAAGATATTCCTATAGGTGTTTCTGGATCTGTAATTATCGTTACTATTCTTTATTGTCTCATGGCTGCTTCAATGTGCATGCTTCTTCCCTACGATATGATTGATCCTGAGGCACCGTTTTCAGCAGCGTTTGAATCGGATGGCTGGGGATGGGCTTCAAGAGTGATAGGAGTGGGGGCCAGTTTTGGAATATTGACATCATTGATAGTTGCTATGTTGGGTCAGGCTCGTTATATGTGTGTTATTGGACGTTCTAATGTGGTCCCTGCTTGGTTTGCTAAGGTCCACCCAAAGACCTCAACTCCTGTCAACGCCTCTGCTTTTCTTGGGATATTCACAGCAGCAATTGCACTTTTCACTGATCTTGATGTTCTCCTAAATCTTGTATCAATTGGAACACTCTTTGTTTTTTACATGGTGGCAAATGCTGTGGTCTATAGACGTTATGTGGTTGCCGGAACAACAAATCCATGGCCAACAGTGTCATTTCTCTTAACATTTTCATTCACTTCCATCATGTTTACCCTCATTTGGAAATGTGTACCATCAGGGGTAGCAAAAGCAGGGATGTTAAGTGCTTGTGGTGTGGTTGCTGTAGCAATATTACAACTTTTTCATTTCACTGTCCCTCAAGCTAGGAAGCCAGAATTTTGGGGTGTACCACTTATGCCATGGATACCAGCTACATCAATTTTTTTGAATTTGTTTTTGCTTGGATCACTTGATGGGCCATCCTATGTTAGATTTGGAGTCTTTTCTGCTGTTGCAGTGCTCTTTTATGTGCTCTATAGTGTTCATGCTAGCTATGATGCTGAAGGAGATGGTTCTCTTAGTCAAAAGAATGTTGAAGTCCATATGGAGTCAAAAGAAGAAAGTGTGGACCAAAGTTTCAAAGTGTAG 1752 0.4486 MASHGSSFSSLRTYLQAVAQTPSRFARRGFSVSTSYEEMSRVRARSGTSMRKTLRWFDLVGFGIGGMVGAGVFVTTGHASRVFAGPAVVLSYAIAGFCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFITGANLIMDYVMSNAAVARGFTAYFGTTIGISSDKWRITVPSFPQGFNQIDMVAVVVVLLITIVICYSTRESSVVNMILTALHILFIAFVIVIGFWKGSWKNFTHSANSENPSGFFPHGAAGVFNGAAAVYLSYIGYDAVSTMAEEVKEPVKDIPIGVSGSVIIVTILYCLMAASMCMLLPYDMIDPEAPFSAAFESDGWGWASRVIGVGASFGILTSLIVAMLGQARYMCVIGRSNVVPAWFAKVHPKTSTPVNASAFLGIFTAAIALFTDLDVLLNLVSIGTLFVFYMVANAVVYRRYVVAGTTNPWPTVSFLLTFSFTSIMFTLIWKCVPSGVAKAGMLSACGVVAVAILQLFHFTVPQARKPEFWGVPLMPWIPATSIFLNLFLLGSLDGPSYVRFGVFSAVAVLFYVLYSVHASYDAEGDGSLSQKNVEVHMESKEESVDQSFKV 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06066 583 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 40 553 - -
Trre1g06066 583 Gene3D Amino acid/polyamine transporter I 49 471 - -
Trre1g06066 583 Pfam Amino acid permease 54 477 IPR002293 GO:0016020|GO:0022857|GO:0055085
Trre1g06066 583 Pfam C-terminus of AA_permease 502 552 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06066 Trre-Chr1 64920583 64924096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06066 141 567 Organic Solute Cotransporters AT3G10600 74.766 0.0 654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g06066 1 64920583 64924096 Trre1g06066 1 64920583 64924096 ECH