Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06047 ATGAATTCTCCAACTTCCTCTTCTTCTTCCTCTGACTTCGTTTCTATAGCCACTGATCAGAGTGCAGCCCGGAGTAGGAGAAGCGGCACCGGCAGTGAAGTGGTGGCGGTGGAACAATCGCGGCGGTGGCATGATGTTTTCTGGTTAGGAATATTTTTGATCCATTTGATTGGACTGGGATTTCTTTTAGGGGTTCTTGGCCTCAATAGGTTTGAGAAAGAGAATAGACTTAACATTGATAAGTATACTCCTGGTATTTCTCGGAATGAGGCCGGGTTGACCGAGACTTACTGGCCGCTCTATGCTGCTGCTGGTGGAATTGGGACTTTCCTTGGATGGACTTGGATGTTGTTGTTGGGTTCCCAAGCTACTCAAATGATGAAGGTTTCTGTTCACATCCTGGCCACTTATCTGGCTGTCATCAGTGTTTTGTGTTTCTGGACTGGCCAGATTTTCTGGGGGGTTGCTTTTGCTGTTGGAGCGGCTCTTCAGTTCTTGTATGTTATATCCGTCATAGATAGACTTCCATTTACGATGTTGGTTCTGCAAAAAGCTGTGAAGATGGTTTGGAATCTTCCTGAGGTGATGAGAGTGTCGTATGTGTTTATGTTTGCTGTGCTTTTATGGATGGCCTTATGGTCATTTGGAGCAGCAGGTGTTGTGGCTTCAAACTTGAGTGACGGGGGACGCTGGTGGCTTCTTGTGGTTTTCTCTGTAAGCTTATTTTGGACAGGTGCAGTTCTCTGCAATACTGTGCATGTTATAGTGTCTGGAATGGTGTTTCTTGTTCTTTTCCATGGTGGTAGAGAGGCAGCTTCAATTCCCGCTAACTCCTTAACGAAATCGTTACAGTATGCTTTAACAACATCTTTTGGTAGCATTTGTTATGGCTCGTTGTTCACTGCTGCTATTAGGACACTGCGATGGGAGATACGCGGACTTCGGTCAAAGATCGGAAACAATGAGTGTTTGCTTTGCTGTGTTGATTTCGTTTTCCATCTTGTGGAGACTCTTGTTCGATTTTTTAACAAATATGCCTACGTTCAGATTGCTGTTAATGGTAAAAGTTTTAACAATTCGGCTAGAGATGCGTGGGAGTTATTCCAGTCAACTGGGGTCGAGGCACTTGTGGCATATGATTGTTCAGGTGCTGTCCTGCTAATGGGCACCATTTTTGGTGGACTGATAACCGGAACTTGCGCTGGTGTATGGGCATGGGTTAAATGGAGCGATAGGGTTATTATGATTGGCTCCACATCCATGCTCATGGGTATGGTTTTGGTTGGATTGGCAATGGTTGTGGTGGAGAGTGCAGTTACATCGATATATATTTGCTACGCAGAAGATCCTTTATTGATTCAGAGATGGGATGCTGATTTTTTCAACCAGATGTCCGAGACATTACATCACCGACTTCAATACAGGAGTGCTCGACCAAGGGACTATCGATTCCATGATGATCCTATACGAGAAAACGCCTCTATTTGA 1488 0.4483 MNSPTSSSSSSDFVSIATDQSAARSRRSGTGSEVVAVEQSRRWHDVFWLGIFLIHLIGLGFLLGVLGLNRFEKENRLNIDKYTPGISRNEAGLTETYWPLYAAAGGIGTFLGWTWMLLLGSQATQMMKVSVHILATYLAVISVLCFWTGQIFWGVAFAVGAALQFLYVISVIDRLPFTMLVLQKAVKMVWNLPEVMRVSYVFMFAVLLWMALWSFGAAGVVASNLSDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLFHGGREAASIPANSLTKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGLRSKIGNNECLLCCVDFVFHLVETLVRFFNKYAYVQIAVNGKSFNNSARDAWELFQSTGVEALVAYDCSGAVLLMGTIFGGLITGTCAGVWAWVKWSDRVIMIGSTSMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDADFFNQMSETLHHRLQYRSARPRDYRFHDDPIRENASI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06047 495 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 35 474 IPR007603 GO:0022857|GO:0055085
Trre1g06047 495 Pfam Plasma-membrane choline transporter 156 450 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06047 Trre-Chr1 64726621 64729883 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g06047 1 64726621 64729883 Trre1g06047 1 64726621 64729883 ECH