Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06009 ATGAGTGCTGCTGCTGCTGCTTTTCTGATTCCAGTATCCTCAATACCCTCTCTCGCTTCTCCTTTCAAGGGAAATGTGAAAACCTTGGTAGCAAAACCATTTCTATGTCCATGTCTCAAAATTCAACGAACAAAACCCCGTGTTTCCGTCGTAATTAATAAGGCTGGTGTTTATACTACTACGACGAAACCAGGCGGTGAAAATGTTCGATTTAGGTTGGACAATTTAGGTCCTCAACCTGGTTCAAGAAAGAGAGCAAAGAGAAAGGGAAGAGGTATATCTGCAGGACAAGGAGCAAGTTGTGGTTTTGGAATGAGGGGTCAAAAATCTCGATCTGGACCTGGTATTATGAGAGGTTTTGAAGGTGGTCAAATGCCACTTTATCGACGACTCCCCAAACTCAGAGGAATTGCTGGAGGTATGCATGCGGGATTGCCAAAGTATGTCAACGTAAATCTGGAGGATATTGAAAACGCTGGATTTCAAGAAGGGGAAGAGGTGTCTTTGGAGACACTGAAGGAGAAACGTGTGATCAACCCATCAGGAAGAGAACGGAAACTTCCTTTGAAGATTTTGGGTGATGGAGAACTAAGCAAGAAGTTAACAATAAAAGCCCGCGCCTTTTCAACAGCAGCAAAAGAGAAACTTGAGTCTGCTGGTTGTTCCCTCACCGTGCTGCCTGGCCGTAAGAAATGGGTTAAGTCATCAATTACCAAAAACAATGCTCGTGCTGAAGAATACTTTGCCAAGAAGCGAGAAGCACCTGCTTCTGAACCGGCTTCTGCTTAA 789 0.4436 MSAAAAAFLIPVSSIPSLASPFKGNVKTLVAKPFLCPCLKIQRTKPRVSVVINKAGVYTTTTKPGGENVRFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLEDIENAGFQEGEEVSLETLKEKRVINPSGRERKLPLKILGDGELSKKLTIKARAFSTAAKEKLESAGCSLTVLPGRKKWVKSSITKNNARAEEYFAKKREAPASEPASA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06009 262 MobiDBLite consensus disorder prediction 74 113 - -
Trre1g06009 262 SUPERFAMILY Ribosomal proteins L15p and L18e 74 225 IPR036227 -
Trre1g06009 262 ProSitePatterns Ribosomal protein L15 signature. 190 220 IPR001196 GO:0003735|GO:0005840|GO:0006412
Trre1g06009 262 Gene3D - 148 225 - -
Trre1g06009 262 PANTHER 50S RIBOSOMAL PROTEIN L15 44 236 IPR005749 GO:0003735|GO:0006412|GO:0015934
Trre1g06009 262 NCBIfam 50S ribosomal protein L15 73 223 IPR005749 GO:0003735|GO:0006412|GO:0015934
Trre1g06009 262 Hamap 50S ribosomal protein L15 [rplO]. 73 226 IPR030878 GO:0003735|GO:0006412|GO:0015934
Trre1g06009 262 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 97 223 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06009 Trre-Chr1 64383675 64388788 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g06009 1 64383675 64388788 Trre1g06009 1 64383675 64388788 ECH