Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06002 ATGGAGCTATCTCTGACTGCGAAACACCGATTCGGATCACAAAATCACTTCCCTTTACCATCAGAACACAATTCTCATAATCACCATCATCTATTTCCAATACCCATTTCAACCAAACTCAACAAATTACCAAAAACAACACTTAGAGTGAGCGCAAAGAAAAAGTCAACCATTGAAGGTATCAGTGATGAGTTGAATTCTATAGCTTCGCTTAACCTCGATTTTGCACCCTCTCGTAGACAGGTTCGAGAAGCCTTCACTCATGTGCATCAGCAACTAGATCATTTCTTATTCAAGACTGCACCTGCTGGGATCATAACTCAAGAATGGTATGAAAGGAATTCAAGGGGATTGGAGATTTTCTGCAAAAGTTGGATGCCAGAACATAGAGTTCCAATCAAGGGGGCTTTATTTTTCTGTCATGGATATGGCAGTACTTGCACTTTCTTCTTTGAAGGTATTGCCAAGCGAATTTCTGCTTCCGGGTTTGGTGTTTATGCAATGGATTTTCCCGGTTTTGGTTTATCTGAAGGATTACATGGTTATATACCAAGTTTTGATGATTTGGTCGATGATGCTATAGAATTTTATACAAAAATTAAAGCTAGGCCTGAGGTGAGAGATTTGCCACAATTTATATTTGGACAGTCAATGGGTGGAGCAATTGCTCTTAAAGCTCATTTGAAGCAACCAAATGATTGGGATGGAGTAATCCTTGTAGCTCCAATGTGTAAGATATCGGAAGGAATGTTACCGTCAACTACAATTTTGAAGGTGCTAACTTTCTTGTCTAAAATGATGCCAAAGGCAAAACTGTTCCCTTACAAGGATCTAACTGCGCTGATTATCCGAGAACCTGGCAAGAGAAAATGGGCCGGTTACAATGTTATTTCTTACAATGATCAAACGCGATTAAGAACCGGCATGGAACTCTTACGTGCCACTCAGGATATTGAGTCACAGTTAGAGAAGGTTTCAGCTCCATTATTGATTCTTCATGGAGCAGAGGATAAGGTGACAGATCCATTGGTGAGCCAATATCTGTATGAAAAAGCATCTAGCAAAGATAAGACACTAAAATTCTATGAAGGAGGCTACCATGGCATTATGGAAGGTGAACCTGATGAAAGAATTTCTGCTGTTCATAGTGACATTATCTCATGGCTTGAATTTAGGTGCACAAGATAA 1188 0.3965 MELSLTAKHRFGSQNHFPLPSEHNSHNHHHLFPIPISTKLNKLPKTTLRVSAKKKSTIEGISDELNSIASLNLDFAPSRRQVREAFTHVHQQLDHFLFKTAPAGIITQEWYERNSRGLEIFCKSWMPEHRVPIKGALFFCHGYGSTCTFFFEGIAKRISASGFGVYAMDFPGFGLSEGLHGYIPSFDDLVDDAIEFYTKIKARPEVRDLPQFIFGQSMGGAIALKAHLKQPNDWDGVILVAPMCKISEGMLPSTTILKVLTFLSKMMPKAKLFPYKDLTALIIREPGKRKWAGYNVISYNDQTRLRTGMELLRATQDIESQLEKVSAPLLILHGAEDKVTDPLVSQYLYEKASSKDKTLKFYEGGYHGIMEGEPDERISAVHSDIISWLEFRCTR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06002 395 FunFam Alpha/beta-Hydrolases superfamily protein 103 395 - -
Trre1g06002 395 SUPERFAMILY alpha/beta-Hydrolases 88 389 IPR029058 -
Trre1g06002 395 Gene3D alpha/beta hydrolase 106 393 IPR029058 -
Trre1g06002 395 PANTHER PHOSPHOLIPASE-RELATED 95 390 - -
Trre1g06002 395 Pfam Serine aminopeptidase, S33 133 374 IPR022742 -
Trre1g06002 395 PRINTS Alpha/beta hydrolase fold signature 162 177 IPR000073 -
Trre1g06002 395 PRINTS Alpha/beta hydrolase fold signature 329 343 IPR000073 -
Trre1g06002 395 PRINTS Alpha/beta hydrolase fold signature 213 226 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06002 Trre-Chr1 64312707 64315773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06002 50 392 Acyl Lipid Metabolism Gene Families AT1G77420 62.391 1.34e-161 457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g06002 1 64312707 64315773 Trre1g06002 1 64312707 64315773 ECH