Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05984 ATGGCAGCAACTCACAGACTCGCTTTGATCATCCAAAATCCTTCAAACAACAACCACTTTCTTCTCGTCAAGCAGTCCCCTCCTTCCAAATTCAACGATCAAGAATACGACTCTTCGGTGCACTTGAACTCACTGCAACAACAATCGGAACCCCCGTTTGAGCTACACATTTCGTCCTCACATTCCGACGAGTTCAATTTCAAGGAATTCGACATCCGTTCTGCTCTCGACGAGGTATTTGGACAATTAGGGTTTGAGATTGTTGAAACGGGAGAATGGAAGTTTCATAAGTATGTTAAGGAATCTGCATTCGGACCTGGTTTGCCTGTTAACACTGTTTTCATTGTTGGGAAACTTGTAGATGAGGCCAAGGAATTTTCAGATTCATATAAATGGATGTCCATTCAAAGCTGTCTTAACTGGCTTGTGGAAGTGATTCCACATGGTGATCGTGTTGGACCGTTGGTAGTTGCTGGTCTTGTAAATGACTCGTCTGCCTCTGCAAATTGGAAAGTCCCTCCAGCCATCAACTACCAGGAGTACCCGACTGGTGTTATACTCATTCCTATGGGAAGTAGGACAGCAAAGCCTTTTCGCACAACAAACTTGGTGGTGTTTGCACCTGAGAATGTTCCAAATGCTTCCGTGGATAATAAACTTATTGCTTGTGGAGATGCACTAATAGTTGATCCAGGATGTCTGTCAGAATTCCATGGAGAGCTAAAGAAAGTTGTTACTGCTTTGCCAAGAAGACTAGTGGTCTTTGTCACCCATCATCACCGAGACCATGTAGATGGTCTCTCAGTTATACAGAAGTGCAATCCTGATGCTATTTTGCTTGCGCATGAGAATACCATGCGACGCATAAGTAAAGAAGATTGGTCACTCGGCTATACCTCAGTTACCGGAGATGAAGACATATACATTGGTGATCAGAAATTGAAAGTTATTTTTGCACCGGGACATACAGATGGCCATATGGCATTGCTTCATGTGAATACACATTCCTTAATTGTAGGTGATCATTGTGTCGGTCAGGGAAGTGCTGTCTTGGACATAACTGCTGGTGGAAATATGTCTGAATACTTCGAAACCACATACAAATTTCTGGAGCTTTCACCGCATGCTTTGATACCTATGCATGGGAGAGTTAATGTCTGGCCAAAGCAGATGTTGTGCGGATATCTAAAGAATCGTAGGAGTAGAGAAGCTAATATCTTAAAAGCTATTGAAGGTGGAGCAAAAACATTGTTTGACATTGTTGCATATGTATATTCTGATGTTGACCGGCGTGCCTGGATTTCTGCGTCATCAAATGTGAGGCTCCATGTGGATCATCTGGCCCAGCAACATAAATTACCAAAGGATTTCTCTCTAGAAACTTTCAATTCCAGTTTGGCTGAAAGCTTGGGTAAATTATAG 1422 0.4269 MAATHRLALIIQNPSNNNHFLLVKQSPPSKFNDQEYDSSVHLNSLQQQSEPPFELHISSSHSDEFNFKEFDIRSALDEVFGQLGFEIVETGEWKFHKYVKESAFGPGLPVNTVFIVGKLVDEAKEFSDSYKWMSIQSCLNWLVEVIPHGDRVGPLVVAGLVNDSSASANWKVPPAINYQEYPTGVILIPMGSRTAKPFRTTNLVVFAPENVPNASVDNKLIACGDALIVDPGCLSEFHGELKKVVTALPRRLVVFVTHHHRDHVDGLSVIQKCNPDAILLAHENTMRRISKEDWSLGYTSVTGDEDIYIGDQKLKVIFAPGHTDGHMALLHVNTHSLIVGDHCVGQGSAVLDITAGGNMSEYFETTYKFLELSPHALIPMHGRVNVWPKQMLCGYLKNRRSREANILKAIEGGAKTLFDIVAYVYSDVDRRAWISASSNVRLHVDHLAQQHKLPKDFSLETFNSSLAESLGKL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05984 473 FunFam Metallo-hydrolase/oxidoreductase superfamily protein 206 387 - -
Trre1g05984 473 FunFam Metallo-hydrolase/oxidoreductase superfamily protein 389 462 - -
Trre1g05984 473 Pfam Beta-lactamase associated winged helix domain 416 452 IPR041516 -
Trre1g05984 473 SUPERFAMILY Metallo-hydrolase/oxidoreductase 223 453 IPR036866 -
Trre1g05984 473 SMART Lactamase_B_5a 215 381 IPR001279 -
Trre1g05984 473 Gene3D - 220 387 IPR036866 -
Trre1g05984 473 Gene3D - 389 461 IPR036388 -
Trre1g05984 473 PANTHER ENDORIBONUCLEASE LACTB2 129 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05984 Trre-Chr1 64130171 64136444 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05984 1 64130171 64136444 Trre1g05984 1 64130171 64136444 ECH