Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05952 ATGACGGAACCTTTGATCCGAACCGTCGTAGAATCTATACACTCTTCTCCATTTCAAGCCGTTCTCTATCTTTCTGGCGGAGCTTCTCAGGTTCTAGGTTTTTTGCTATCTGTTCCTGGTGCTTCCAATACTGTTCTTGAAGCTGTTGTTCCTTACTCTAGGATGTCTTTGATTCAGTTACTTACCAAGATTCCATCTCAATTTTGTAGTCAACAAACTGCTGAAGATATGGCTTTATTGGCTTATAATCGTGCTCTTAAGCTCTCCTCTCCAGGATCCCCAGTTGTTGGTGTGGGTTTCACCGGTTCTTTGGCTAGCAATCGTCCAAAACATGGGGAACATAGATTTTATATGTCAACAAGGACAGCTGACCGACTTTGGATATCAAGAGTGACCTTGACTAAGGGGCTTCGTACTCGAGAAGAAGAAGATAGAGTTTCTAGTCATCTTTTGCTCAAGGCTATTGCAAATGCATGTAAGGTTCCTTCAAACGCTATCCCAGAGTTGAGTGAATCGGATGTATCTGATGAATGTGAAAAGCAATTCAATGAAGATCAAGAGTTAGAACAACTTATAAATGGTCAAATATGCTTCAAGATTTATCCATTTAGAAGTGAGATCCCAGCTGAAAGGAAAATAATACTGCCTGGTTCTTTCAATCCTCTACATGATGGGCATCTTAAACTCATGGAAGTTGCAGCGCGCATTTGTGGTGATGGGTATCCATGCTTTGAAATATCTGCGGTCAATGCAGACAAACCTCCATTAACATTGTCTCAGATCAAAGATCGTGTCGATCAATTTAAAAAAGTTGGACAGACAGTAATTCTATCCAATCAGCCTTATTTTTATAAGAAAGCTGAACTTTTTCCGGGCAGTGCTTTTGTAATTGGCGTTGACACAGCAGTGAGGCTTATTAATCCTAAATACTATGATGGGGACTACAACAAGATGCTGAAGATACTTATTGGTTGTAAAGAAACAGGATGCACTTTCCTTGTGGGTGGTCGGAATGTAGATGGTGCATTTAAGGTTCTTGATGATTTGAATGTTCCAGAGGAACTAAAAGACATGTTCATCTCCATTCCAGCTGAACAGTTTCGAATGGATATATCATCTACTGAAATAAGGAAAAAAAGTGGGATGTAA 1149 0.3995 MTEPLIRTVVESIHSSPFQAVLYLSGGASQVLGFLLSVPGASNTVLEAVVPYSRMSLIQLLTKIPSQFCSQQTAEDMALLAYNRALKLSSPGSPVVGVGFTGSLASNRPKHGEHRFYMSTRTADRLWISRVTLTKGLRTREEEDRVSSHLLLKAIANACKVPSNAIPELSESDVSDECEKQFNEDQELEQLINGQICFKIYPFRSEIPAERKIILPGSFNPLHDGHLKLMEVAARICGDGYPCFEISAVNADKPPLTLSQIKDRVDQFKKVGQTVILSNQPYFYKKAELFPGSAFVIGVDTAVRLINPKYYDGDYNKMLKILIGCKETGCTFLVGGRNVDGAFKVLDDLNVPEELKDMFISIPAEQFRMDISSTEIRKKSGM 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05952 382 Gene3D - 5 160 IPR036653 -
Trre1g05952 382 PANTHER NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE 5 380 - -
Trre1g05952 382 SUPERFAMILY Nucleotidylyl transferase 211 378 - -
Trre1g05952 382 Gene3D HUPs 208 381 IPR014729 -
Trre1g05952 382 FunFam Os01g0691500 protein 3 161 - -
Trre1g05952 382 FunFam Cytidyltransferase isoform 1 207 382 - -
Trre1g05952 382 Pfam Cytidylyltransferase-like 215 378 IPR004821 GO:0003824|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05952 Trre-Chr1 63925723 63936603 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05952 1 63925723 63936603 Trre1g05952 1 63925723 63936603 ECH