Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05944 ATGGGAATCATCCAATACGATCCAATCTATTCTCTCTGCAAAGTTTCGTCAACCTTCCGTCGTTTCCCACGCGCCACCGCCCCCTTTCGTCTTAAAGCCTTCTCCACCGCCGTTCACGATAAGCCCTCCATTTGCACCGCCGACGAACTTCACTATGTCTCCGTCTCTAATTCCGATTGGAAACTCGCTCTCTGGCGCTACCACCCTTCTCCTCAGGCACCTCCCAGGAATCATCCTCTGCTGCTTTTGTCAGGAGTGGGGACAAATGCCGTAGGATATGACCTTTCCCCTAGGTCATCCTTTGCACGTCACATGTCTGGTCAGGGATTTGAGACTTGGATTCTTGAAGTACGAGGAGCTGGGTTGAGTGTTCAGGGTTCAAATTCCAAAGATATTGAACAGTCTGCCCATGAAATGTCTGAGAAGATGGAAGATGTGTTGGAAAATGCAACCAATGGACCCATGTCTTCAAAAAAGGAATTGGATAACATAACTGGTGCTGTATCTGGACCTTACAATTCTGCCTCAGAAGGAGTAGAAACAGAGAATGTGGCTGTCGTAGGAGACCTAGCTAGGTTAGGTACTGCTTGGGATGAATCAAAGTTGGTTGCTAGGTTGTCTGAGACTTTTACGCGTTTGTCAGAAAGAGTCTCTGGCTTTCTTGGTGAAAGTCAAGCGAAGGTCATGTCTGCCAAATTACTTGATCAGTTTTCAAAACTTTTGGTGGATTCTCCATTATATGAACAATTCAATGAGGTAAGGGGAAAGCTTGCAACTTTGTTGGAAACGAGACAAAATTCTGGAATTACTAGTCAAATAACTGATCTGAGTGAAAAACTAGTAGATATTTTTGAGGCAGGCCAGCTATCTGTTTCTCCTCCACTATTTGATTTGCAAGCTCGCTTTACTTCTACAATTGAAGATTTCCAGAAGCAACTGGATTTGATGGTGAAGTACAATTGGGACTTTGATCATTACTTGGAAGAAGATGTTCCTGCAGCGATAGAATACATTCTGAAACAAAGCATGCCAAAAGACGGAAAATTGCTTGCAATTGGACATTCCATGGGAGGCATCTTGTTGTATTCAATGCTGTCACGGTCTGGTTTTGAAGGAAAGGAACCCAAATTTGCTGCAGTAGTCACACTGGCATCATCTCTGGACTACAGATCATCCAAATCAACTTTGAAGTTACTCTTGCCTCTTGCAGATCCTGCACAGGCTCTGAGTGTCCCTGTTGTTCCTTTAGGGGCAATGTTGGTAGCAGCTTACGAGGTTTCATCCCGTTCACCATATGCATTGTCATGGTTAAATACTTTAATTTCAGCCGAGGGCATGATGGATCCTGATTTATTTAAAAGGCTGGTTTTGAATAACTTCTGCACCATACCCGCAAAACTTCTCTTACAACTCACAACAGCATTTCGAGAGCGTGGTTTATGCAATAGGGATGGGACATTTTTTTACAAGGAACATCTACACAAAAGCACTGTACCTATTTTAGCAATTGCTGGAGACAAGGATCTGATTTGCCCACCTGAAGCTGTGGAAGATACCGTTAAACTAATTCCTGAGCATCTGGTTACGTATAAACTTTTTGGGGATCCCGAAGGCCCACATTATGCTCATTATGACTTGGTTGGAGGAAGACTGGCAGTGGAACAAGAATATCCTTGTATAGTTGAATTTCTTAGCTGTCACGACAAGTGA 1710 0.4363 MGIIQYDPIYSLCKVSSTFRRFPRATAPFRLKAFSTAVHDKPSICTADELHYVSVSNSDWKLALWRYHPSPQAPPRNHPLLLLSGVGTNAVGYDLSPRSSFARHMSGQGFETWILEVRGAGLSVQGSNSKDIEQSAHEMSEKMEDVLENATNGPMSSKKELDNITGAVSGPYNSASEGVETENVAVVGDLARLGTAWDESKLVARLSETFTRLSERVSGFLGESQAKVMSAKLLDQFSKLLVDSPLYEQFNEVRGKLATLLETRQNSGITSQITDLSEKLVDIFEAGQLSVSPPLFDLQARFTSTIEDFQKQLDLMVKYNWDFDHYLEEDVPAAIEYILKQSMPKDGKLLAIGHSMGGILLYSMLSRSGFEGKEPKFAAVVTLASSLDYRSSKSTLKLLLPLADPAQALSVPVVPLGAMLVAAYEVSSRSPYALSWLNTLISAEGMMDPDLFKRLVLNNFCTIPAKLLLQLTTAFRERGLCNRDGTFFYKEHLHKSTVPILAIAGDKDLICPPEAVEDTVKLIPEHLVTYKLFGDPEGPHYAHYDLVGGRLAVEQEYPCIVEFLSCHDK 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05944 569 PANTHER LYSOSOMAL ACID LIPASE-RELATED 51 566 - -
Trre1g05944 569 SUPERFAMILY alpha/beta-Hydrolases 51 564 IPR029058 -
Trre1g05944 569 FunFam Alpha/beta hydrolase family protein 314 566 - -
Trre1g05944 569 PIRSF UCP031088_abhydr 6 569 IPR016969 -
Trre1g05944 569 Gene3D alpha/beta hydrolase 48 147 IPR029058 -
Trre1g05944 569 Gene3D alpha/beta hydrolase 309 566 IPR029058 -
Trre1g05944 569 ProSitePatterns Prolyl endopeptidase family serine active site. 330 360 IPR002471 GO:0004252|GO:0006508
Trre1g05944 569 Pfam alpha/beta hydrolase fold 324 543 IPR000073 -
Trre1g05944 569 FunFam Alpha/beta hydrolase family protein 49 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05944 Trre-Chr1 63869616 63876220 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05944 1 63869616 63876220 Trre1g05944 1 63869616 63876220 ECH