Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05940 ATGGCGTTGGGGGGCTTGTTGTCTTTTGCTAAATTTTGGGGATTCTTTCAGGGAGGGAGACAGATTGACCCTTCTGCACATACAATAAAGTCTCATGGAGCCACACTTGCAAGAAATCATCTTCATGATTGGCTTATATTGGTGCTTCTCATACTAATAGAGGTTATCCTCAATGTAATTCATCCATTTCGCCGTTTTGTGGGAAGGGATATGATGGAAGACCTTATGTATCCAATGAAAGAAAACACTGTGCCTATATGGGCTGTTCCTCTTTATGCAGTTTTGTTGCCAATAACTGTGTTCCTCTTCTTCTATATGCGTAGGAGAGATGTTTATGATTTGCACCACAGTGTTCTAGGCCTCCTATTTGCTGTTCTGATAACTGGGGTGTTGACCGATTCAATTAAAGACGGTGTTGGCCGGCCACGACCAGACTTCTTTTGGCGTTGCTTTCCTGATGGAGTACAGGTGTATGATAGATTAGGAGGTGTAGTTTGCCATGGCAAGGCCAGTGATATAAAAGAAGGACATAAGAGTTTTCCAAGTGGTCATACATCATGGTCCTTTGCAGGTCTTGGTTTTCTCTCCTTGTATCTATCCGGGAAGATTAAAGTTTTTGATCGTAAAGGGCACGTTGCAAAATTATGCATTGTGTTTTTACCTCTACTTGTTGCATGTATGGTTGGAATCTCTAGAGTGGATGACTATTGGCACCATTGGCAAGATGTGTTTGCTGGAGGTCTTTTAGGTCTTGTTGTTACCACATTTTGCTATTCACAATTCTTCCCTCCTCCTTATAATGATGATGGATGGGGTCCATATGCATATTTTGTGGCTATGGAGGAATCAAGAAACAATGCAAGTGTGAATAGGGAATCACCTGTTGTACAAACCATGGATGATAGTAGGCTTGCAAATCAAGTGCCAAGGAGAAATGGTGATGCATTCACCCCTTTCACTTATCTTAGCCCAACCTTGGAAGCCATGGAGATGGGACACAACAACACACAAGCGAAGTTATCATGA 1026 0.422 MALGGLLSFAKFWGFFQGGRQIDPSAHTIKSHGATLARNHLHDWLILVLLILIEVILNVIHPFRRFVGRDMMEDLMYPMKENTVPIWAVPLYAVLLPITVFLFFYMRRRDVYDLHHSVLGLLFAVLITGVLTDSIKDGVGRPRPDFFWRCFPDGVQVYDRLGGVVCHGKASDIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIKVFDRKGHVAKLCIVFLPLLVACMVGISRVDDYWHHWQDVFAGGLLGLVVTTFCYSQFFPPPYNDDGWGPYAYFVAMEESRNNASVNRESPVVQTMDDSRLANQVPRRNGDAFTPFTYLSPTLEAMEMGHNNTQAKLS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05940 341 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 40 265 IPR036938 -
Trre1g05940 341 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 40 269 - -
Trre1g05940 341 SMART acid_phosph_2 118 258 IPR000326 -
Trre1g05940 341 PANTHER LIPID PHOSPHATE PHOSPHATASE 29 295 IPR043216 GO:0006644
Trre1g05940 341 FunFam Lipid phosphate phosphatase 2 38 269 - -
Trre1g05940 341 CDD PAP2_containing_1_like 75 261 - -
Trre1g05940 341 Pfam PAP2 superfamily 118 262 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05940 Trre-Chr1 63819172 63823798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05940 20 302 Lipid Metabolism Gene Families AT3G02600 67.944 7.28e-153 430
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05940 1 63819172 63823798 Trre1g05940 1 63819172 63823798 ECH